Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01268 ATGAAGAAGGTCACAACAATTGTTTCAATAGTTTTGATCTCGCTACTTTGTTTCCACGAACTCGTCTACGTTTCTTCGTCACCTTTCTTATACGCAAGCCAGGTCTATGAGGAATCTTCTGCTGAAAGAAAACTTGAACAGGGTCGGGAACATGCTCAAGAATTGCATTGCTCCAGGGAGAGAAGTAGGGCAGCTCGGAAAGTGATAGACGAGTATTTGACACCATTTGTGGAACGAGAAAACTACCAGCTTTTGAGTAAATGCAGACTTCACCCTGAAAATGATATATTCATGGATCAGGAAGAGCATAAAATCTTCATAAATACACACGAATGGCGGTGTGGATATTGTAAGAAAAGCTTTCGGGAAGAGAAATTTCTCGATCAGCATTTTGATAACAGACACTACAATCTTCTGAATCTAAGTCATGGTAAATGCTTGGCTGATGTATGTGGGGCGATGCATTGTGATGCTGTGATGAATTTCAGATCCTCCAGAAGCAAGTGCAATCCGACAGCTGCTGCAAGAAACCGTCATCTATGTGAGAGTCTTGCGGACAATTGTTTTCCTATTAGTGAGGGTCCTTCAGCAGGCCGCCTTCATGAATTATTTCTGCACCAATTTTGTGATGCTCACACTTGCTCAGGGAAAAATAAACCCTTCTCTCGAGGAGGCAAGGATCAAAGTAGTTTCTTTCGCCTGGCTGCTGGAGCATTGATCTTGGTGCTACTTCCTGTGTTCTATCTTTTTCTTTATTTGGTACAAAGTGATGCGAAGAATCGAACACAAGAGCTTCGTCGGATTTCAAAAGCTCAATGGAAAGCCAAACCGTCATGA 837 0.4241 MKKVTTIVSIVLISLLCFHELVYVSSSPFLYASQVYEESSAERKLEQGREHAQELHCSRERSRAARKVIDEYLTPFVERENYQLLSKCRLHPENDIFMDQEEHKIFINTHEWRCGYCKKSFREEKFLDQHFDNRHYNLLNLSHGKCLADVCGAMHCDAVMNFRSSRSKCNPTAAARNRHLCESLADNCFPISEGPSAGRLHELFLHQFCDAHTCSGKNKPFSRGGKDQSSFFRLAAGALILVLLPVFYLFLYLVQSDAKNRTQELRRISKAQWKAKPS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01268 278 ProSiteProfiles Zinc finger C2H2 type domain profile. 112 135 IPR013087 -
Spst8g01268 278 PANTHER ZINC FINGER PROTEIN-RELATED 13 277 - -
Spst8g01268 278 ProSitePatterns Zinc finger C2H2 type domain signature. 114 135 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01268 Spst-Chr8 11785306 11794071 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01268 32 278 C2H2 Transcription Factor Family AT5G63280 59.438 1.99e-104 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst8g01268 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01268 - - gmx:100780668 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01268 8 11785306 11794071 Spst8g01268 8 11785306 11794071 ECH