Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01252 ATGAATGAAAGACACACGCCGCTGTTATGTTTGCAGGAGACACGTGGCCACGCCATCCGTCAGTCGTTCGGGCAAGGTGGCGACGCCAATGCTGGAAGAGAATACAAGGACGACCTCCTCTGGTTCTGCGACATCGGAAGGTTTGCCGCCGGCGATTTCTCCATGGTCGTCGTTCAGGCTAATCAGGTACTCGAGGACCAGAGCCAGATCGAGTCCGGACCCTTCGGCACCTTCGTCGGCGTCTACGACGGCCACGGCGGTCCTGATTGCTCGCAATACGTTTGCGATGACTTGTTCCGTAATCTCCAAGCGATATTGGCCGAGTCACAGAGTGTTGTGACATCTGAGGCCATTCAACAAGCGTTTCGGCGGACTGAGGAGGGGTTCACGGCGCTTGTTTCAAAGTTGTGGAACTCCCGGCCGCAGATTGCGACCACTGGGACATGTTGTGTGTTGGGGTGGTGGTGGTGA 471 0.5669 MNERHTPLLCLQETRGHAIRQSFGQGGDANAGREYKDDLLWFCDIGRFAAGDFSMVVVQANQVLEDQSQIESGPFGTFVGVYDGHGGPDCSQYVCDDLFRNLQAILAESQSVVTSEAIQQAFRRTEEGFTALVSKLWNSRPQIATTGTCCVLGWWW 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01252 156 PANTHER PROTEIN PHOSPHATASE 37 149 IPR015655 GO:0004722|GO:0006470
Spst8g01252 156 Gene3D - 46 155 IPR036457 -
Spst8g01252 156 ProSitePatterns PPM-type phosphatase domain signature. 78 86 IPR000222 GO:0043169
Spst8g01252 156 SUPERFAMILY PP2C-like 61 153 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01252 Spst-Chr8 11560958 11568860 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01252 39 153 PP2C-type Phosphatase Gene Family AT3G17090 64.348 9.01e-52 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01252 K01102 - gmx:100813333 231.491