Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst8g01251 | ATGGCAGCTATGATGGATTTCTACAACGGACAAGGTCAAGTTCAGTCAGATCCATTCAGAGGTGAGCTCATGGAAGTTCTAGAACCTTTTATGAAAAGTCCTTCCTCAACTCCCTCTTTATCTTCGGATTCACCTTTCCCTTCAACTTCAACTTCATATTCCTACTCTCCTTCCCCACTTTCAATCCCTCCACACCCCAATTTCTACACAGACCCTTCCTCCAACCTATTCCAAACCCCAACCCTGATAGGCTTTGAACAACAACCCACTTCTGCTATCGGGCTCAACCACCTAAGCCCGTTTCAGGTTTCTCAGATCCAGGCCCAGATCCAGGCCCAGAGCCAGTCCTCCCTCTCCCTGAACTTCCTGACTCCCAAGCCCGTGCCCATGAAGCAAGTGGGTGGGCCTGCGAAGCCCACGAAGCTGTACCGCGGGGTGAGGCAGAGGCATTGGGGAAAGTGGGTGGCGGAGATCAGACTCCCCAAGAACCGAACCAGGCTCTGGCTCGGAACCTTCGACACCGCCGAGGAAGCCGCTTTGGCGTATGACAAAGCCGCGTACAGACTCCGAGGCGACTTCGCCAGGCTCAACTTCCCGAACCTTAAAGGTTCGTGCCTCAGCGAGTACAAGCCTCTGCAGTCCGCGGTGGACGCTAAGCTCGATGCCATTTGTCAGAGCCTGGCCGAAATGCCGAAGCAGGGGAAGACAGAGAAGGGTGCCAGGTCATGCAGGAAGTCCAAAGCAGTTCCAAAGGAGGCTCAGAATCCGAACCAGGACTCCAAGCCTAACTCGAACCTGAACGTTTCGTGCAAGACCGAACCGGAACCTGAACCAGAACCTGCTCTGTCTCCTGAAAGCGAGGGTTCTGTGGATTCTTCTCCGCTCTCTGATCTTACCTTCGATGTCGCCGAGCCGCAGTGGGAAGATGCTTCTGCACATTTTAACTTGCAGAAGTTTCCTTCTTATGAGATCGATTGGGATTCTCTGTGA | 990 | 0.5354 | MAAMMDFYNGQGQVQSDPFRGELMEVLEPFMKSPSSTPSLSSDSPFPSTSTSYSYSPSPLSIPPHPNFYTDPSSNLFQTPTLIGFEQQPTSAIGLNHLSPFQVSQIQAQIQAQSQSSLSLNFLTPKPVPMKQVGGPAKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYRLRGDFARLNFPNLKGSCLSEYKPLQSAVDAKLDAICQSLAEMPKQGKTEKGARSCRKSKAVPKEAQNPNQDSKPNSNLNVSCKTEPEPEPEPALSPESEGSVDSSPLSDLTFDVAEPQWEDASAHFNLQKFPSYEIDWDSL | 329 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst8g01251 | 329 | ProSiteProfiles | AP2/ERF domain profile. | 142 | 199 | IPR001471 | GO:0003700|GO:0006355 | |
Spst8g01251 | 329 | Pfam | AP2 domain | 143 | 191 | IPR001471 | GO:0003700|GO:0006355 | |
Spst8g01251 | 329 | MobiDBLite | consensus disorder prediction | 234 | 248 | - | - | |
Spst8g01251 | 329 | CDD | AP2 | 141 | 201 | IPR001471 | GO:0003700|GO:0006355 | |
Spst8g01251 | 329 | FunFam | Ethylene-responsive transcription factor 2 | 141 | 200 | - | - | |
Spst8g01251 | 329 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 | 5 | 329 | - | - | |
Spst8g01251 | 329 | MobiDBLite | consensus disorder prediction | 31 | 58 | - | - | |
Spst8g01251 | 329 | MobiDBLite | consensus disorder prediction | 251 | 271 | - | - | |
Spst8g01251 | 329 | SUPERFAMILY | DNA-binding domain | 142 | 199 | IPR016177 | GO:0003677 | |
Spst8g01251 | 329 | SMART | rav1_2 | 142 | 205 | IPR001471 | GO:0003700|GO:0006355 | |
Spst8g01251 | 329 | MobiDBLite | consensus disorder prediction | 32 | 58 | - | - | |
Spst8g01251 | 329 | MobiDBLite | consensus disorder prediction | 234 | 304 | - | - | |
Spst8g01251 | 329 | Gene3D | AP2/ERF domain | 142 | 200 | IPR036955 | GO:0003700|GO:0006355 | |
Spst8g01251 | 329 | PRINTS | Ethylene responsive element binding protein signature | 165 | 181 | IPR001471 | GO:0003700|GO:0006355 | |
Spst8g01251 | 329 | PRINTS | Ethylene responsive element binding protein signature | 143 | 154 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst8g01251 | Spst-Chr8 | 11559318 | 11560307 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst8g01251 | 1 | 329 | AP2-EREBP Transcription Factor Family | AT1G78080 | 49.719 | 2.02e-86 | 261 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Spst8g01251 | AP2 | 1.3e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst8g01251 | K09286 | - | gmx:100802961 | 403.675 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst8g01251 | 8 | 11559318 | 11560307 | Spst9g01193 | 9 | 11074778 | 11075839 | PCT |