Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01248 ATGACGAACCGTAATGTGAATAACACGCTTGTGGAGTTGGCAATGTCGATTTCTAACTCAAGTGCTCTACCAAGAGCTGCTGTGCCTGGAATAATGGCTTTGCTTGGTGGGGTTTTAGGCCTACCCCAGAAAAAGCTCTTATTGAAAACTTTGGAGGATGGAAGTGGAAAAGGAGGCCACAAAGTTAACACATTGATTGATTCAATGAGAGCTTCTTCTCCGACTCGAGTCAAATCCACACAAAACCAAGACCCGAGTCCTTGGACTCTTTACCACCCTTCGGCACTTAACATGTTTGATCAGATTGTATGTGAGTCCAAAGGGAAGCAGATTGTCACTTTTCTTGACTATGATGGAACTCTCTCCCCAATTGTTGCAGACCCAGATAAAGCATACATGAGTCAAAAGATGAGGGCCACACTGAAGGACATAGCAAGGCATTTCCCCACTGCCATCGTGAGTGGAAGGTGCATAGACAAGGTGTATAACTTTGTGAGATTGGCAGAACTGTACTATGCTGGGAGCCATGGGATGGACATTAAGGGGCCAACAAATAGGCGAAGTACTAAGAAAGGAAACGAACAAGTACTCTTCCAACCCGCGAGTGAATTCTTACCCATGATCAATGAGGTGTACAACATCTTGGTAGAAAAAACAAAGCCTGTCCCGGGGGCTAAGGTAGAAAATAACAAGTTTTGCTTGTCCGTGCACTTTCGCTGTGTTGACGAAAAGAGTTGGGCATCATTGGCTGAACAAGTTAGCTTGGTCATCAGCGACTATCCCAAACTTAAGCTAACTGAAGGGAGAAAAGTGCTCGAGATTCGACCAACCGTAAAATGGGACAAGGGCAAGGCCCTTGAATTCTTGCTAGAATCACTAGGATATGCTAACTCTGATAATGTATTTCCAATCTATATTGGTGATGATCGAACTGACGAAGATGCTTTTAAGGTTTTGCGGAAGAGGGGCCAAGGGATTGGGATTCTTGTTTCTAAAATTCCAAAAGAAACGGATGCTTCCTACACTTTGCAAGATCCAACTGAGGTAACAAAATCATGTTTTGTTCACAGGTTGGGCAGTTTTTGCGGCATTTGGTGGAGTGGAAAAGAACGAGTACCCAATACCACAAGTTGTAGATTCTTGATGAGTTCAGGGAAATTGACACCAACCCAGAATTTGGTCAAGGGGTGGTTCCAATTATATCCCTTTCTTGTTGGAAATAGGAAATAG 1230 0.4374 MTNRNVNNTLVELAMSISNSSALPRAAVPGIMALLGGVLGLPQKKLLLKTLEDGSGKGGHKVNTLIDSMRASSPTRVKSTQNQDPSPWTLYHPSALNMFDQIVCESKGKQIVTFLDYDGTLSPIVADPDKAYMSQKMRATLKDIARHFPTAIVSGRCIDKVYNFVRLAELYYAGSHGMDIKGPTNRRSTKKGNEQVLFQPASEFLPMINEVYNILVEKTKPVPGAKVENNKFCLSVHFRCVDEKSWASLAEQVSLVISDYPKLKLTEGRKVLEIRPTVKWDKGKALEFLLESLGYANSDNVFPIYIGDDRTDEDAFKVLRKRGQGIGILVSKIPKETDASYTLQDPTEVTKSCFVHRLGSFCGIWWSGKERVPNTTSCRFLMSSGKLTPTQNLVKGWFQLYPFLVGNRK 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01248 409 MobiDBLite consensus disorder prediction 52 86 - -
Spst8g01248 409 FunFam Trehalose 6-phosphate phosphatase 207 362 - -
Spst8g01248 409 Gene3D - 193 277 - -
Spst8g01248 409 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 55 358 IPR044651 GO:0004805|GO:0005992
Spst8g01248 409 Gene3D - 114 343 IPR023214 -
Spst8g01248 409 NCBIfam trehalose-phosphatase 109 351 IPR003337 GO:0003824|GO:0005992
Spst8g01248 409 CDD HAD_TPP 114 349 - -
Spst8g01248 409 Pfam Trehalose-phosphatase 114 346 IPR003337 GO:0003824|GO:0005992
Spst8g01248 409 NCBIfam HAD-IIB family hydrolase 114 321 IPR006379 -
Spst8g01248 409 SUPERFAMILY HAD-like 114 351 IPR036412 -
Spst8g01248 409 MobiDBLite consensus disorder prediction 66 86 - -
Spst8g01248 409 FunFam Trehalose 6-phosphate phosphatase 201 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01248 Spst-Chr8 11535694 11537893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01248 107 351 Trehalose Biosynthesis Gene Families AT1G70290 26.820 5.94e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01248 K01087 - gmx:100792915 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01248 8 11535694 11537893 Spst9g01191 9 11058453 11060359 PCT