Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01235 ATGAATGGTGAGCATCAGTATGAAAGAGATTATGAAGTATGTGGTTCCTTTAGTTCTGCATACTTGGCCGTTTCGGTTGTAGCTTCTCGTTCTTCATCCAACACAGGTAAGGGGAAAAATCATGAGGGGTCAATAAAGTATGGTTTCACCCTAGTGAAAGGGAGAGCTAACCATCCAATGGAGGATTACCATGTTGCAAAGTTTGTACAGATGCAGGAAAAGGAATTGGGTCTGTTTGCTATTTATGACGGCCACATGGGAGATACTGTTGCTTCCTACTTACAGAAACATTTGTTTTCCAACATTTTAAAGGAGGAAGAATTTTGGGATAACCCTGCCGCATCTATATCCAAAGCATATCAGAGCACAGATCAGGAGATTCTGTCACGTAGTTCTGATTTGGGGCATGGCGGATCAACAGCTGTAACTGCAATATTAATCAATGGCCAAAGGTTATGGATAGCTAATGTAGGAGATTCACGCGCAGTTCTTTCAAGAAAAGGCCAAGCAGTGCAAATGACTACAGATCATGAGCCCAACACAGAGCGAGGCAGCATTGAGAATAAAGGAGGTTTTGTCTCCAATATGCCAGGTGATGTGCCTAGAGTAAATGGGCAACTTGCTGTGTCTCGCGCGTTTGGAGACAAGAGTCTCAAGTCACATTTACGATCGGACCCTGATGTACAGACTACTGATGTAGATGCTGATATTGATATTCTAATCCTTGCCAGTGATGGACTTTGGAAGGTAATGCCTAATCAAGAGGCAGTGGACATTGCTAGAAGGATGAGAGACCCTTTGAAAGCAGCTAAGCAATTAACAGCTGAAGCATTGAAAAGAGACTGTAAAGATGATATCTCTTGCGTTGTGGTTACATTTAGGTGA 885 0.4271 MNGEHQYERDYEVCGSFSSAYLAVSVVASRSSSNTGKGKNHEGSIKYGFTLVKGRANHPMEDYHVAKFVQMQEKELGLFAIYDGHMGDTVASYLQKHLFSNILKEEEFWDNPAASISKAYQSTDQEILSRSSDLGHGGSTAVTAILINGQRLWIANVGDSRAVLSRKGQAVQMTTDHEPNTERGSIENKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQTTDVDADIDILILASDGLWKVMPNQEAVDIARRMRDPLKAAKQLTAEALKRDCKDDISCVVVTFR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01235 294 MobiDBLite consensus disorder prediction 168 193 - -
Spst8g01235 294 SMART PP2C_SIG_2 57 293 IPR001932 -
Spst8g01235 294 Gene3D - 41 294 IPR036457 -
Spst8g01235 294 SUPERFAMILY PP2C-like 44 293 IPR036457 -
Spst8g01235 294 ProSiteProfiles PPM-type phosphatase domain profile. 46 293 IPR001932 -
Spst8g01235 294 SMART PP2C_4 42 291 IPR001932 -
Spst8g01235 294 Pfam Protein phosphatase 2C 55 286 IPR001932 -
Spst8g01235 294 CDD PP2Cc 45 293 IPR001932 -
Spst8g01235 294 PANTHER PROTEIN PHOSPHATASE 39 293 IPR015655 GO:0004722|GO:0006470
Spst8g01235 294 FunFam Probable protein phosphatase 2C 39 37 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01235 Spst-Chr8 11368534 11373219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01235 15 294 PP2C-type Phosphatase Gene Family AT1G22280 69.930 3.22e-143 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01235 K17506 - gmx:100797292 457.218