Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst8g01226 | ATGAAACTTAACTTGACAGGATTTGTCAATAGAATAAGAAATGTGAAGCGATCACCGTCGGACTGGAAAGATGCCGGAGAATTTATAGGACAAGATGTTCTACCAATATTCATAGCAGCTAGATGTTTATTTGGACTCTCACTTTTGCTACTGCTATTCGTCTATAAATGGCGACGAAGACATTTTTCAGTGTATGAAAACATTGAAAACTTTTTGTTGGACATCAATATAAATCCCATTAGATACGAATACAGAGAAGTAAAGAAAATGACTAAAGGTTTCAAAGTGAAATTAGGTCAAGGAGGTTTTGGTTCTGTGTACAAGGGAAAGCTTCAAAGTGGGTTAGATGTAGCAGTAAAGATGTTGAACAAATCCAAAGATAACGGACAAGAGTTTGTTAATGAAGTGGCTACCATTGGAAGAATACATCATGTGAATGTGGTAGGTCTTATTGGATATTGTGTTGAAGGAAAGAGGCGTGGTTTAGTTTATGAATACATGTCTAATGGGTCATTGGATAAATACATTTTCTCTAAAGAAGGAAGTGTTCCTCTAAGTTATGAGAAGATATATGAAATATCTCTTGGAATTGCTCATGGGATGGCATATCTACATCGAGGTTGTGATGTGCAGATTTTACATTTTGATATCAAACCTCATAATATTCTTTTAGATGACAATTTTACTCCAAAAGTTTCAGATTTTGGACTTGCAAAGTTATATCCTACAAAAGACAGATCTATTATTTTAACTGCAGTAAGAGGAACGTTGGGCTACATGGCTCCAGAATTATTCTACAAAAATATAGGTGGAGTTTCTTATAAGGCTGATGTCTATAGTTTTGGAATGCTTTTGATGGAAATGACAAGTAGGAGGAAAAACTCAGATCCTCATGCAGAGCATTCAAGCCAGCATTACCTCCCCTTTTGGATCTATGATCAATTTAAAGAAGAAAAAGATATTGACATGGAAGGTGCTTCGGAAATGGACAAGATTCTAATGAAGAAAATGTTTATAGTTGCACTTTGGTGTATACAATTAAAACCAAGTGATCGGCCATCAATGAGCAAGGTTGTAGAGATGCTTGAAGGAAACATTGAAAGTCTTGAAATTCCTTCCAAACCTTCTTTTTGTCCCCATGAAATCTTTGAACATGATGATACACTCAACTCTGACGAAATATCATGGAGTGATTCAACTAGTTCTAATGTGAATATTGGCCAAAACATGCCTAATCAATAA | 1242 | 0.3527 | MKLNLTGFVNRIRNVKRSPSDWKDAGEFIGQDVLPIFIAARCLFGLSLLLLLFVYKWRRRHFSVYENIENFLLDININPIRYEYREVKKMTKGFKVKLGQGGFGSVYKGKLQSGLDVAVKMLNKSKDNGQEFVNEVATIGRIHHVNVVGLIGYCVEGKRRGLVYEYMSNGSLDKYIFSKEGSVPLSYEKIYEISLGIAHGMAYLHRGCDVQILHFDIKPHNILLDDNFTPKVSDFGLAKLYPTKDRSIILTAVRGTLGYMAPELFYKNIGGVSYKADVYSFGMLLMEMTSRRKNSDPHAEHSSQHYLPFWIYDQFKEEKDIDMEGASEMDKILMKKMFIVALWCIQLKPSDRPSMSKVVEMLEGNIESLEIPSKPSFCPHEIFEHDDTLNSDEISWSDSTSSNVNIGQNMPNQ | 413 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst8g01226 | 413 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 212 | 224 | IPR008271 | GO:0004672|GO:0006468 | |
Spst8g01226 | 413 | CDD | STKc_IRAK | 98 | 364 | - | - | |
Spst8g01226 | 413 | FunFam | serine/threonine-protein kinase PBS1-like | 63 | 166 | - | - | |
Spst8g01226 | 413 | ProSiteProfiles | Protein kinase domain profile. | 92 | 383 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst8g01226 | 413 | SMART | serkin_6 | 92 | 362 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst8g01226 | 413 | ProSitePatterns | Protein kinases ATP-binding region signature. | 98 | 120 | IPR017441 | GO:0005524 | |
Spst8g01226 | 413 | Gene3D | Phosphorylase Kinase; domain 1 | 72 | 166 | - | - | |
Spst8g01226 | 413 | Pfam | Protein kinase domain | 96 | 360 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst8g01226 | 413 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 65 | 382 | IPR045874 | GO:0004672 | |
Spst8g01226 | 413 | SUPERFAMILY | Protein kinase-like (PK-like) | 77 | 363 | IPR011009 | - | |
Spst8g01226 | 413 | FunFam | PR5-like receptor kinase | 167 | 374 | - | - | |
Spst8g01226 | 413 | PIRSF | TyrPK_CSF1-R | 10 | 181 | - | - | |
Spst8g01226 | 413 | PIRSF | TyrPK_CSF1-R | 173 | 409 | - | - | |
Spst8g01226 | 413 | Gene3D | Transferase(Phosphotransferase) domain 1 | 167 | 373 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst8g01226 | Spst-Chr8 | 11289940 | 11291181 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst8g01226 | 81 | 395 | Receptor kinase-like Gene Family | AT5G38280 | 50.000 | 9.42e-104 | 320 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Spst8g01226 | Pkinase | 4.5e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst8g01226 | - | - | var:108336466 | 662.144 |