Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01222 ATGGAAACAATACAAGGAAACCTAAGATTTAGAGAAGCCTTGTACTTAAGCGTGGTATCATATTCCATAGGACACTATGTTATACCATTATTGATGGTAGTCAGAATTTTGTTTGGGGTGATATTACTTACTGTGATTTTGATATACAAATGGCGCAAAAGGCATTTGTCAATGTATCAAAATATTGAAAATTATCTGGAGCAGAATAACTTGATGCCTATCAGATACTCGTACAAGGAGATCAAGAAGATGGTGAGAGGTTTCAATGAAAAATTGGGTGAAGGAGGGTATGGCTCTGTGTACAAGGGAAAGATGCGTAGTGGATCTTATGCGGCAATAAAAATGTTAGGTAAATCAAAAGGTAATGGTCATGATTTTATAAGTGAAGTTGCCACCATCGGAAGAATACATCATCAAAATGTAGTACAACTAATTGGATTTTGTGTTGAGGGTTCAAAGCGTGCTCTTGTTTATGAATTCATGTCCAATGGATCTCTTGATAAAATTATTTTTTCGAAAGATAGAAGTGTAGATTTAAGCTATGAAAAAATATACAATATATCAATTGGAGTAGCTCGTGGGATTGCTTATCTTCACCACGGGTGTGAGATGCAAATTTTGCATTTCGACATCAAGCCCCACAATATTCTACTTGATGATAATTTCGTTCCAAAGGTTTCTGACTTTGGATTGGCAAAGTTATATCCTGGAGATAATAGCATTGTCACCGTGACAGCTGCAAGAGGGACAATTGGATATATGGCTCCAGAATTATTTTATAAAAACATTGGAGGAATATCCTATAAATCTGATGTTTATAGTTTTGGAATGCTTTTAATGGAGATGGCAAGCAGGAGAAAAAACTTAAATGCTCAAGTAGAGCATTCAAGTCAAATATACTTTCCTGAATGGGTTTATGATCACCTTAGAAAAGATAGAGATATAGACATGGAAGATATCACAGAGGAGGAAAAGAAAATAGTGAAAAAGATGATGATAGTTGCCCTCTGGTGTATACAAATGAAACCAAATGATCGTCCCTCCATGAATAAGGTAGTGGAAATGCTTGAAGGAGACATTGAAGACTTAGAAATCCCTGAAAATTTTTCTTTATATCCATATGAATCGACAGAAGACTCTAAGCAAACAAAATCTGGTAAATATATTAGTTCTTGTAGTTATTCTACGGCTGCTGAAACTAATCCTTTTATACCGAATAGTATTTGA 1227 0.3488 METIQGNLRFREALYLSVVSYSIGHYVIPLLMVVRILFGVILLTVILIYKWRKRHLSMYQNIENYLEQNNLMPIRYSYKEIKKMVRGFNEKLGEGGYGSVYKGKMRSGSYAAIKMLGKSKGNGHDFISEVATIGRIHHQNVVQLIGFCVEGSKRALVYEFMSNGSLDKIIFSKDRSVDLSYEKIYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDDNFVPKVSDFGLAKLYPGDNSIVTVTAARGTIGYMAPELFYKNIGGISYKSDVYSFGMLLMEMASRRKNLNAQVEHSSQIYFPEWVYDHLRKDRDIDMEDITEEEKKIVKKMMIVALWCIQMKPNDRPSMNKVVEMLEGDIEDLEIPENFSLYPYESTEDSKQTKSGKYISSCSYSTAAETNPFIPNSI 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01222 408 ProSiteProfiles Protein kinase domain profile. 86 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01222 408 Pfam Protein kinase domain 89 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01222 408 FunFam serine/threonine-protein kinase PBS1-like 55 160 - -
Spst8g01222 408 Gene3D Phosphorylase Kinase; domain 1 59 160 - -
Spst8g01222 408 Gene3D Transferase(Phosphotransferase) domain 1 161 368 - -
Spst8g01222 408 SUPERFAMILY Protein kinase-like (PK-like) 71 357 IPR011009 -
Spst8g01222 408 PANTHER RUST RESISTANCE KINASE LR10-RELATED 59 376 IPR045874 GO:0004672
Spst8g01222 408 PIRSF TyrPK_CSF1-R 8 170 - -
Spst8g01222 408 PIRSF TyrPK_CSF1-R 162 403 - -
Spst8g01222 408 ProSitePatterns Protein kinases ATP-binding region signature. 92 114 IPR017441 GO:0005524
Spst8g01222 408 FunFam PR5-like receptor kinase 161 367 - -
Spst8g01222 408 SMART serkin_6 86 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01222 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01222 Spst-Chr8 11281510 11282736 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01222 36 383 Receptor kinase-like Gene Family AT4G18250 47.238 7.36e-110 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst8g01222 Pkinase 5.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01222 - - vun:114195039 619.002