Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01218 ATGACAGCGGCAAGAGGGACAATTGGATATATGGCTCCAGAATTGTTTTATAAAAATATTGGTGGAATATCCTATAAGTCTGATGTTTATAGTTTTGGAATGCTTTTAATGGAGATGGCGAGCAGGAGGAAAAACTTAAATGCTCAAGCAGAGCATTCAAGCCAAATGTACTTTCCCGAATGGGTTTATGATCACCTTAAAGAAGATAAAGATATAGAAATGAAAGATATCACAGAGGAGGAAAAGAAGTTAGCGAAGAAAATGATGACAGTTGCACTTTGGTATATAAAAATGAAACCAAATGATCGTCCCTCGATGACCAAAGTGGTGGAAATGCTTGAAGAAGACATTGAAAACTTGGAAATCCCTCCAGATTTTTCCTTATATCCATATGAGGAGACAAAAGACTCTAAGCAAACAAAATCAGAAGTTTAA 435 0.3586 MTAARGTIGYMAPELFYKNIGGISYKSDVYSFGMLLMEMASRRKNLNAQAEHSSQMYFPEWVYDHLKEDKDIEMKDITEEEKKLAKKMMTVALWYIKMKPNDRPSMTKVVEMLEEDIENLEIPPDFSLYPYEETKDSKQTKSEV 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01218 144 ProSiteProfiles Protein kinase domain profile. 1 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01218 144 SUPERFAMILY Protein kinase-like (PK-like) 2 114 IPR011009 -
Spst8g01218 144 Gene3D Transferase(Phosphotransferase) domain 1 1 131 - -
Spst8g01218 144 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 133 IPR045874 GO:0004672
Spst8g01218 144 Pfam Protein kinase domain 2 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01218 Spst-Chr8 11254177 11254778 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01218 1 134 Receptor kinase-like Gene Family AT5G38280 49.275 4.29e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst8g01218 Pkinase 1.3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01218 - - vun:114195039 222.246