Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01217 GACACCATTGTTGTTGGCAGTCAGAATTTTGTTTGGGGTGACATTACTTATTGTGATTTTGATATACAAATGGCACAAAAGGCATTTTATTTGGAGCAGAATAACTTGATGCCTATCAGATACTCATACAAGGAGATCAAGAAGATGGTGAGAGGTTTCAATGAAAAATTGGGTGAAGGAGGGTATGACTCTGTGTACAAGGGAAAGATGCGTAGTGGATCTTATGTGGCAATAAAAATGTTAGGTAAATCAAAAAGTAATGGAAATGATTTTATAAGTGAAGTTGCCACCATCGGAAGAATACATCATCAAAATGTAGTACAGTTAATTGGATTTTGTGTGGAGGGTTCAAAGCGTGCTCTTGTTTATGAAGTCATGTCTAATGGATCTCTTGATAAAATTATTTTTTCTAAAGATAGAAGTGTAGATTTAAGCTATGAGAAAATATAA 450 0.3422 DTIVVGSQNFVWGDITYCDFDIQMAQKAFYLEQNNLMPIRYSYKEIKKMVRGFNEKLGEGGYDSVYKGKMRSGSYVAIKMLGKSKSNGNDFISEVATIGRIHHQNVVQLIGFCVEGSKRALVYEVMSNGSLDKIIFSKDRSVDLSYEKI 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01217 149 ProSiteProfiles Protein kinase domain profile. 51 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01217 149 FunFam serine/threonine-protein kinase PBS1-like 21 125 - -
Spst8g01217 149 SUPERFAMILY Protein kinase-like (PK-like) 34 142 IPR011009 -
Spst8g01217 149 Pfam Protein tyrosine and serine/threonine kinase 53 141 IPR001245 GO:0004672|GO:0006468
Spst8g01217 149 PANTHER RUST RESISTANCE KINASE LR10-RELATED 29 139 IPR045874 GO:0004672
Spst8g01217 149 Gene3D Phosphorylase Kinase; domain 1 22 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01217 Spst-Chr8 11253530 11254004 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01217 36 146 Receptor kinase-like Gene Family AT1G66980 49.107 2.44e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst8g01217 PK_Tyr_Ser-Thr 2.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01217 - - vun:114195039 205.297