Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01215 ATGGCAAAGTCTGGAATACCGTCCCTGCATGGTTATTGCATATTCATCACACTAATGCTATTGCTAATGCTCATTCCTATCGAAGGTATCGGCAGTCATAAGGAGTGCAGCGAGTTGTCTTGTGGGCCTAACCAATCGCCTATTATTCGATTTCCCTTCCAAATCGTCAAGGGGGTCAAAGATGAATGTCCTCATCCTGGATATTGTCTCTATTGCACTCAAGAAAAGAACACCATGTTAGTCCTCCCTACAATACAACTCCGCGTCAGGGCCATAGACTACGAACTTCAACAAATTTACTTGGAAGACCAGAACCATTGCCTTCCAAAAATGTTTCTGAACCACACCAAATTTTTTATTGATTATTACCATACCGAATCACAGAGCTTGATCTTCTTTGACTGTTCTTCAGTTGGGTATAGACACCTCAGAAACAGATATAGATACTCACAAGATATGATCTCCTGTCCGATTTACGTTGCTGATTCTCAAGAAAGTGTCCTGGATTTGGACCTGACATTCTGTTCCAGGAAGTTCGACGTCACTGCACCTGCCACGGCATACGAGTTGCATCAGAATCAGTTGGTGTTGAGATGGTACAAACCAGATTGTAATACGTGCGAAGCGCAAGACAAAAGATGTAAATGGAAGAACAACAGCACCGAAGTTGTCGAATGTTTTGATTGCTATGACCGCAAGGGCCACCAGAAAAGAATTCCGAATTTCAGATCTTTTGTTGTTTCAGCTGCAGGTTCAATTCTTTTGGGCCTGCTAATCATTGTCGCTTTTAAGATTTTCCGCTGTTTTAGAAAGAAGGAAGAAGACCAAGCAAGAGTGGACAAGTTCTTAGAGGATTACAGGGCAGAAAAGCCTACAAGATTTACCTACGCTGATGTCAAAAGAATCACAAGTGGTTTTAAAGAAAAACTAGGGGAAGGAACTCATGGAGCTGTTTTCAGAGGCAAACTTTCAAATGAGATTCTCGTGGCTGTGAAGATCCTCAATAACACTGACGGAGATGGAAATGAGTTCATCAATGAAGTGGGAATTATGGGGAAAATCCACCACATCAACGTGGTTCGTTTGCTAGGCTTCTGCGCCGACGGGATCCATCGTGCTCTTGTCTTCAATTTGTTTCCAAAGGGTTCGCTACAAAGCTTCATATTTCCACCCGATGACAAGGACCATTTTCTTGGCTGGGAGAAGATACAAGACATTGCTCTTGGTATAGCTAAAGGGATTGAGTATCTTCATCAAGGTTGTAACTATCCCATTATTCACTTTGACATCAATCCTCACAATGTGTTACTAGATGACAACTTCACTCCAAAGATTTCTGATTTTGGCTTAGCCAAATTGTGTTCCAAGAATCGTAGTTTGGTGTCCATGACAGCTGCTAGAGGAACCTTGGGATACATTGCACCTGAAGTTTTCTCCAGGAACTTCGGAAATGTGTCCTATAAGTCTGATATTTACAGTTACGGAATGTTGCTGTTAGAAATGGTTGGAGGAAGGACGAATGTAGACATGTCATCCGCACAAAATTTCCATGTTCTGTACCCAGATTGGATCCATAACCTAGTTGATGGAGACATACACATCAATGTTGAGGATGAAGGTGACGCTAAAATTGCGAAGAAGCTAGCCATTGTTGGACTTTGGTGCATTCAGTGGCAGCCAGTGAACCGTCCATCCATAAAATCTGCCATACAAATGCTAGAAACTAAAGAGGAAAACCAATTAACTGTGCCTCCTAACCCATTTCACTCAACAACTTCCACTACTGTTAGGGGACGTATTTCAGGAAGAAGACCTTTGGAGTTGGAAGCAATTCAAGAGTGA 1842 0.4224 MAKSGIPSLHGYCIFITLMLLLMLIPIEGIGSHKECSELSCGPNQSPIIRFPFQIVKGVKDECPHPGYCLYCTQEKNTMLVLPTIQLRVRAIDYELQQIYLEDQNHCLPKMFLNHTKFFIDYYHTESQSLIFFDCSSVGYRHLRNRYRYSQDMISCPIYVADSQESVLDLDLTFCSRKFDVTAPATAYELHQNQLVLRWYKPDCNTCEAQDKRCKWKNNSTEVVECFDCYDRKGHQKRIPNFRSFVVSAAGSILLGLLIIVAFKIFRCFRKKEEDQARVDKFLEDYRAEKPTRFTYADVKRITSGFKEKLGEGTHGAVFRGKLSNEILVAVKILNNTDGDGNEFINEVGIMGKIHHINVVRLLGFCADGIHRALVFNLFPKGSLQSFIFPPDDKDHFLGWEKIQDIALGIAKGIEYLHQGCNYPIIHFDINPHNVLLDDNFTPKISDFGLAKLCSKNRSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRTNVDMSSAQNFHVLYPDWIHNLVDGDIHINVEDEGDAKIAKKLAIVGLWCIQWQPVNRPSIKSAIQMLETKEENQLTVPPNPFHSTTSTTVRGRISGRRPLELEAIQE 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01215 613 Gene3D Phosphorylase Kinase; domain 1 277 377 - -
Spst8g01215 613 PANTHER RUST RESISTANCE KINASE LR10-RELATED 276 591 IPR045874 GO:0004672
Spst8g01215 613 SUPERFAMILY Protein kinase-like (PK-like) 288 576 IPR011009 -
Spst8g01215 613 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Spst8g01215 613 ProSiteProfiles Protein kinase domain profile. 304 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01215 613 Pfam Protein kinase domain 307 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01215 613 FunFam serine/threonine-protein kinase PBS1-like 271 378 - -
Spst8g01215 613 FunFam PR5-like receptor kinase 379 584 - -
Spst8g01215 613 Gene3D Transferase(Phosphotransferase) domain 1 379 586 - -
Spst8g01215 613 Pfam Wall-associated receptor kinase galacturonan-binding 36 103 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01215 Spst-Chr8 11216799 11218725 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01215 12 587 Receptor kinase-like Gene Family AT1G66910 33.386 9.96e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst8g01215 Pkinase 5.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01215 - - gmx:100813645 866.685