Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01208 ATGGAGCGCTATGAGATTCTTAAAGATATTGGCTCTGGGAATTTTGCTGTGGCCAAACTGGTTAGGGACAACTGCACCAATGAGCTTTTTGCTGTCAAGTTTATTGAGAGAGGCCTGAAGATTGACGAGCATGTCCAGAGGGAAATCATGAACCATAGATCATTGAAGCATCCCAATATTATTAGATTCAAAGAGGTCCAGCTGACACCAACACATCTAGCAATAGTAATGGAGTATGCTTCTGGAGGAGAACTATTTGAGAGGATATGCACTGCTGGTAGATTCAGTGAGGATGAGGCGAGGTTTTTCTTTCAGCAATTGATATCTGGAGTCAGTTACTGTCATTCAATGCAAATTTGTCATAGAGATCTGAAGCTTGAAAATACACTGTTAGATGGAAGCACTGCACCGCGAGTTAAAATTTGTGACTTTGGTTACTCAAAGTCATCAGTATTGCATTCACAACCTAAGTCTACGGTAGGAACTCCAGCTTATATTGCACCTGAGGTTCTTACAAGGAAGGAGTATGATGGAAAGATTGCAGATGTATGGTCTTGTGGAGTCACCTTATATGTGATGTTAGTTGGGGCTTATCCTTTTGAAGACCCTGCAGACCCAAGAAACTTCAAAAAAACCATTGGTAAGATACTTAGTGTCCAGTACTCGGTCCCCGATTATGTACGAGTTTCCATGGAATGTAGACATCTTCTATCACAAATATTTGTGGCAAGTCCTGAAAAGAGAGTAACAATACCAGAAATTAAAAATCATCCATGGTTTTTAAGGAACTTACCCATAGAACTGATGGAAAGTGGAAGCTGGCAAATAAATAACCCATCACAAAGTGTTGACGAAGTCCTGTCTATAGTACAAGAGGCAAGAAAATCTCTTAAGATTCCCATTGTTGGTGGCCTTCTTACTGGGGGCAGCATGGACCTGGATGACTTGGATGCTGATGAAGAAGATCTTGAAGATGTAGAAACAAGTGGAGAATTTGTGTGTCCTCTTTAA 1011 0.4075 MERYEILKDIGSGNFAVAKLVRDNCTNELFAVKFIERGLKIDEHVQREIMNHRSLKHPNIIRFKEVQLTPTHLAIVMEYASGGELFERICTAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPADPRNFKKTIGKILSVQYSVPDYVRVSMECRHLLSQIFVASPEKRVTIPEIKNHPWFLRNLPIELMESGSWQINNPSQSVDEVLSIVQEARKSLKIPIVGGLLTGGSMDLDDLDADEEDLEDVETSGEFVCPL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01208 336 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Spst8g01208 336 Gene3D Transferase(Phosphotransferase) domain 1 80 267 - -
Spst8g01208 336 PANTHER SERINE/THREONINE KINASE 2 273 - -
Spst8g01208 336 FunFam Serine/threonine-protein kinase SAPK2 1 79 - -
Spst8g01208 336 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Spst8g01208 336 SUPERFAMILY Protein kinase-like (PK-like) 2 284 IPR011009 -
Spst8g01208 336 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01208 336 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Spst8g01208 336 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01208 336 CDD STKc_SnRK2 3 259 - -
Spst8g01208 336 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01208 336 FunFam Serine/threonine-protein kinase SRK2E 80 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01208 Spst-Chr8 11109451 11112337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01208 3 285 CBL-interacting serine-threonine protein kinases AT4G24400 39.384 1.92e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Spst8g01208 Pkinase 3.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01208 K14498 - gmx:100798091 625.935