Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01185 ATGTTAAGCCCGAACCTAAACCCTAATTACGGCCTCACACCCTTCTTCCCTCCCTATTGCGCAGCTATATCACTGTATCCACAAGCCTTTGACGCGAATGAGAAGGTTCACATGGTTTACGCCGCATTGTCTTCTTCGGCCAACCGTGACTACTACCGAGTTCTCGGTGTTCCTGAAAATGCCAGTCAGGACGAGATAAAGAAGGCATTTCACTTGCTTGCTAAGAAGTACCATCCAGATGCAAATAAGAGCAATCCATCTGCCAAGAGGAAATTTCAAGATATAAGAGAAGCATATGAGACATTGAGAGATTCTAAAAAGAGAGCACGGTATGATGAGATGCATACTCGTGGTTCAGAAAATATGGAATATGGTCAGGACAATGCAGAAAGGTTTAGAAATGCTTATCGCTCTCATTTTTCGGATTCATTTCATAAAGTATTCTCTGAGATATTTGAAGAAGCGAAAACTCAATTCTCATCAAATATAGAGGTGGAGTTGTCTCTTACTTTCTCAGAAGCAGCAAGAGGATGCACCAAGCATGTGTCATTTGATGCATTAGTTCCCTGCGATTATTGCAATGGGCAGGGTTATCCTCTTGATGCCATGGCAAAAGTTTGTCCAACATGCAGGGGCTTAGGTCGAGTTACAATTCCCCCATTTACATCAACATGCATAACTTGTAAAGGATCTGGCCGAATAATTAAGGAAATTTGTATTAAATGTAGAGGATCTGGAGTGGATGAAGGAGTTAAAGACGTTAAAGTTACCATACCAGCAGGTGTGGATTCGGGAGATACAATCCATGTGCCAGAAGGTGGGAATGCTGCTGGAAGTGGAGGTCGACCTGGAAGTTTATACATTAAAATAAAGGCAATTTTCTTTACTGGTGACATTAACTTGGTGGCTGAGGATTCAATCTTTACCAGAGATGGGGCAGATATATACGTTGAGTCTAATATTAGCTTTACACAGGCTATTCTTGGTGGCAAAGTTGAGGTGCCTACTTTATCTGGGAAGATGCAATTAAAAGCTTTACCAGCAGCTATCTACTGGTTGAACTTACAGGTGGCAGCAAATTCTTGA 1086 0.418 MLSPNLNPNYGLTPFFPPYCAAISLYPQAFDANEKVHMVYAALSSSANRDYYRVLGVPENASQDEIKKAFHLLAKKYHPDANKSNPSAKRKFQDIREAYETLRDSKKRARYDEMHTRGSENMEYGQDNAERFRNAYRSHFSDSFHKVFSEIFEEAKTQFSSNIEVELSLTFSEAARGCTKHVSFDALVPCDYCNGQGYPLDAMAKVCPTCRGLGRVTIPPFTSTCITCKGSGRIIKEICIKCRGSGVDEGVKDVKVTIPAGVDSGDTIHVPEGGNAAGSGGRPGSLYIKIKAIFFTGDINLVAEDSIFTRDGADIYVESNISFTQAILGGKVEVPTLSGKMQLKALPAAIYWLNLQVAANS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01185 361 Pfam DnaJ central domain 190 246 IPR001305 GO:0031072|GO:0051082
Spst8g01185 361 CDD DnaJ 50 104 IPR001623 -
Spst8g01185 361 Pfam DnaJ C terminal domain 163 344 IPR002939 -
Spst8g01185 361 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 177 247 IPR036410 -
Spst8g01185 361 CDD DnaJ_zf 190 246 IPR001305 GO:0031072|GO:0051082
Spst8g01185 361 ProSitePatterns Nt-dnaJ domain signature. 92 111 IPR018253 -
Spst8g01185 361 PRINTS DnaJ domain signature 70 85 IPR001623 -
Spst8g01185 361 PRINTS DnaJ domain signature 52 70 IPR001623 -
Spst8g01185 361 PRINTS DnaJ domain signature 87 107 IPR001623 -
Spst8g01185 361 PRINTS DnaJ domain signature 107 126 IPR001623 -
Spst8g01185 361 ProSiteProfiles dnaJ domain profile. 50 115 IPR001623 -
Spst8g01185 361 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 36 344 - -
Spst8g01185 361 SUPERFAMILY Chaperone J-domain 46 144 IPR036869 -
Spst8g01185 361 Gene3D - 303 351 - -
Spst8g01185 361 SMART dnaj_3 49 107 IPR001623 -
Spst8g01185 361 SUPERFAMILY HSP40/DnaJ peptide-binding domain 307 342 IPR008971 GO:0006457|GO:0051082
Spst8g01185 361 CDD DnaJ_C 161 344 - -
Spst8g01185 361 Gene3D DnaJ domain 46 160 IPR036869 -
Spst8g01185 361 Gene3D - 186 219 - -
Spst8g01185 361 Gene3D - 220 253 - -
Spst8g01185 361 Gene3D - 161 291 - -
Spst8g01185 361 Pfam DnaJ domain 50 112 IPR001623 -
Spst8g01185 361 ProSiteProfiles Zinc finger CR-type profile. 177 251 IPR001305 GO:0031072|GO:0051082
Spst8g01185 361 SUPERFAMILY HSP40/DnaJ peptide-binding domain 162 292 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01185 Spst-Chr8 10837902 10848734 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01185 41 112 C2H2 Transcription Factor Family AT1G74250 41.558 3.95e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01185 - - gmx:100799962 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01185 8 10837902 10848734 Spst8g01185 8 10837902 10848734 ECH