Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01183 ATGCGATCACCGAATGAAATGAAAAAGAAACGAAAAGAAAGCGAGGCCAACGAGCGGTCGAACCTGCCGGAGATTTTGAAGTCGCATTACTCGCTGGAGCGTGGTTCGAGGCTTAACAAACGGTGCAGGGAAGACGGCCTGGCCACGATTCCCACTCGCGGCGCGTCGTTACTTTTGACGCCGGCACGGGGACTGAAGCGGAAGATAGGGTGCATTGACAACGCCACGCAGATGGGGAGGAGCGTGAGGATCGAGGACGATTACTTGACGGGGGGGAGCACGATCGGGCAGGGGAAGTTCGGGTCGGTGACGGTGTGCCGCGCACGTGCGGGGGGTGCCGTGTACGCTTGCAAGACGCTGAGAAAGGGGGAGGAGACGGTGCATCGCGAGGTGGAGATAATGCAGCACGTGTCGGGGCACCCAGGGGTCGTGACTCTGAAAGCGGTGTATGAGGATGCGGAGTGTTGGCACCTTGTCATGGAGTTGTGCTCTGGGGGGAGATTGGTTGATAAGATGAAGGAGGGCCCGTGTTCGGAACTCGTGGCGGCTGGGATACTGAAGGAGGTGATGATGGTGGTTAAGTATTGTCATGATATGGGCGTGGTACATAGGGATATTAAGCCTGAGAATGTTTTGCTTACTGGAACTGGGAAGATCAAGCTCGCTGATTTCGGCCTCGCCATCAGGATTTCTGAGGGTCAGAATTTGACAGGTGTGGCTGGGAGCCCTGCATATGTTGCACCAGAAGTGTTGTTGGGTAGATATTCTGAGAAGGTGGATATATGGAGTTCCGGGGTGCTCCTTCATGCTTTGTTGGTTGGTGTCCTTCCATTTAAAGGAGATTCACAGAAGGCAGTTTTTGAGGAAATTAAAAATGTCAAACTAGATTTCCAAACGGGGGTGTGGGAATCCATATCTAAACCTGCACGAGATCTTGTTGGGAAAATGCTGACCAGGGATGTTTCAGCAAGGATAACAGCTGATGAAGTACTAAGCCATCCATGGATATTGTTCTACACGGCACGAACATTGGAGATGCTGCCTGTAAAATCAAAATTGAAACTCCAAAATGCAGCTACTTGCCACAAGTTTGTTGCTGCACCCGAGTCTGGGTTTAGGGGAAACAAGATGGATAATGGTTCCCTAAATGGTTCAAGCACGTTTTCATCCTCTGAAAGTTGCAATTCAGAATATCATGATGATTGTGAGTGGATTGATGCACTTGCCACTGCAGTTTCACATGTGACTATATCCGGAACAAAGAGAACCAAGGTGTGGGGTCCCACTGGTCCAATTGATCCACAAGGTTCATCTAACTTGAAGACTAACCTCTGTAAAGCATTCTGA 1347 0.5041 MRSPNEMKKKRKESEANERSNLPEILKSHYSLERGSRLNKRCREDGLATIPTRGASLLLTPARGLKRKIGCIDNATQMGRSVRIEDDYLTGGSTIGQGKFGSVTVCRARAGGAVYACKTLRKGEETVHREVEIMQHVSGHPGVVTLKAVYEDAECWHLVMELCSGGRLVDKMKEGPCSELVAAGILKEVMMVVKYCHDMGVVHRDIKPENVLLTGTGKIKLADFGLAIRISEGQNLTGVAGSPAYVAPEVLLGRYSEKVDIWSSGVLLHALLVGVLPFKGDSQKAVFEEIKNVKLDFQTGVWESISKPARDLVGKMLTRDVSARITADEVLSHPWILFYTARTLEMLPVKSKLKLQNAATCHKFVAAPESGFRGNKMDNGSLNGSSTFSSSESCNSEYHDDCEWIDALATAVSHVTISGTKRTKVWGPTGPIDPQGSSNLKTNLCKAF 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01183 448 ProSiteProfiles Protein kinase domain profile. 89 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01183 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Spst8g01183 448 MobiDBLite consensus disorder prediction 1 28 - -
Spst8g01183 448 ProSitePatterns Protein kinases ATP-binding region signature. 95 118 IPR017441 GO:0005524
Spst8g01183 448 Gene3D Phosphorylase Kinase; domain 1 91 168 - -
Spst8g01183 448 PANTHER SERINE/THREONINE-PROTEIN KINASE 75 359 - -
Spst8g01183 448 FunFam Maternal embryonic leucine zipper kinase 86 366 - -
Spst8g01183 448 SMART serkin_6 89 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01183 448 CDD STKc_CAMK 92 335 - -
Spst8g01183 448 Gene3D Transferase(Phosphotransferase) domain 1 169 368 - -
Spst8g01183 448 Pfam Protein kinase domain 93 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01183 448 MobiDBLite consensus disorder prediction 1 22 - -
Spst8g01183 448 SUPERFAMILY Protein kinase-like (PK-like) 87 369 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01183 Spst-Chr8 10824862 10827807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01183 73 336 EF-hand Containing Proteins AT4G04720 44.727 1.45e-77 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst8g01183 Pkinase 7.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01183 - - gmx:100809977 721.85