Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01167 ATGCGCTACCTGACTTGCAACGCGGAGACCGCAATAGCCACATGCCATCCTCACTCCCTCAAGAAGACCAAAAAGCCCAAAAGCCCAACACAGGCCCACACCGTCCAACACTTTGCCTACTCCGACATCCTCGCCGCTACCAACCACTTCTCCGCCGACACCTTCCTAGGCAAAGGCAGCCACGGCAGCGTCTACAAAGCCACCCTCCATGGTGGCGCACTCATCGCCGCCGTCAAAAAAACCAAACCCTCCAAGGAGATCGAAATCCTCTCCCATGTCAAAAGCCCGCGCTTGGTCAACCTTATTGGCTTCTGCAACGACCGAACCAACAACAATAACAAACTCATTGTTGTCGAGTACATGCCCAACGGTTCGCTCCACGACCTTCTTCACTCCACCAAAATTCGCCCCCCCGGTTGGACCGAGCGGGTCCGGTTCGCGGTTCACCTGGCGAAAGGGATTCGGTTTTTGCACTCGTTCGAACCGCCCGTCATTCACCGGGACATTAAATCGTCCAATGTATTAATCGACGAGAAGTGGAACGCGCGACTCGGTGACTTCGGACTCGCGTTTAGAGGACACGCGGCGGATTCTTGCGTGGCGCCTGCGGGGACGTTAGGATACCTCGACCCGTGCTATCTTGCGCCGGGGGACTTGAGTCCCAAGAGCGATGTCTTCAGTTTTGGAATCTTGCTGCTGGAGATTGCGAGTGGAAGGCACGCGATTGACGTGAGGCACAGTCCTCCGTCCGTGTTGGATTGGGCGGTGCCGTTGATCCGGCGCGGCGACTTTCGGGAGATTTACGACCAGCGGATCGGGGCGCCGCCGGACATGGCGGCGTTCCGTCGATTGGTGGTGCTAGCAGCGAGTTGCTTGAGGTCCACGGCGGAGAGACGGCCTACGATGGCGGAGGTGGTGGAGTGTCTGACGATGGTGAGGAAGAATTTTGATGCGCCGGTGATGTGGAGGAGAATGAAGCGCCGCGTGGTGAAGGCGCGTGAGGATTTGTTCCCTGATTGGGACAGGAGTGAGGAATCTGTGAGAGTGGTTAAGGCTGGGAGCAGAAGCTGCAGAAGGAATGGGAAGGTATCCAGTGTGTCGGGTGTAGCGTATGAGAGTCGACCCGCGAATCACACGGTTAGGTCTAGATCCGTTGGTCCTGGTTTTTTCAGGGAAATGAAAATTAATTCGGGTTTGGAATGGTACCCAAGCCAAATTGGGTCCGGGTATAGGAAAGTATCGAGACTAAAGAGATCGAGGTCTATGGGTTTTTTGGGACATTACGGTGGAGAGTGGAAGACTTGTCATGAGAGATATAAGGATACTCATGATAATAACTATGATACAGTGAATTCGATGGAGATGGAACTTGCAAAGTTGGGCATTGTGGATAAGAAAATGGAACAAAAAATGCAAGAAAAAGCGTTGGTCTGTTGA 1437 0.5393 MRYLTCNAETAIATCHPHSLKKTKKPKSPTQAHTVQHFAYSDILAATNHFSADTFLGKGSHGSVYKATLHGGALIAAVKKTKPSKEIEILSHVKSPRLVNLIGFCNDRTNNNNKLIVVEYMPNGSLHDLLHSTKIRPPGWTERVRFAVHLAKGIRFLHSFEPPVIHRDIKSSNVLIDEKWNARLGDFGLAFRGHAADSCVAPAGTLGYLDPCYLAPGDLSPKSDVFSFGILLLEIASGRHAIDVRHSPPSVLDWAVPLIRRGDFREIYDQRIGAPPDMAAFRRLVVLAASCLRSTAERRPTMAEVVECLTMVRKNFDAPVMWRRMKRRVVKAREDLFPDWDRSEESVRVVKAGSRSCRRNGKVSSVSGVAYESRPANHTVRSRSVGPGFFREMKINSGLEWYPSQIGSGYRKVSRLKRSRSMGFLGHYGGEWKTCHERYKDTHDNNYDTVNSMEMELAKLGIVDKKMEQKMQEKALVC 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01167 478 Gene3D Transferase(Phosphotransferase) domain 1 121 330 - -
Spst8g01167 478 Pfam Protein kinase domain 53 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01167 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Spst8g01167 478 Gene3D Phosphorylase Kinase; domain 1 10 120 - -
Spst8g01167 478 PANTHER OS01G0253100 PROTEIN 25 313 - -
Spst8g01167 478 SMART serkin_6 50 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01167 478 ProSitePatterns Protein kinases ATP-binding region signature. 56 80 IPR017441 GO:0005524
Spst8g01167 478 SUPERFAMILY Protein kinase-like (PK-like) 34 321 IPR011009 -
Spst8g01167 478 ProSiteProfiles Protein kinase domain profile. 50 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01167 Spst-Chr8 10376595 10378031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01167 38 309 Receptor kinase-like Gene Family AT3G59420 41.176 1.89e-61 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Spst8g01167 Pkinase 1.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01167 - - vun:114194010 721.85