Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01164 ATGGGAGAAAATTGTGAAACCTGGATTCCGGAGCTGCTTTTTGATTGGCAATCTCCCAATTTGAGCTCCTTCAATGCTGCACCGTTTGGCATGGGGAAGCAAAATGGCACTACTGCAGCTATGAATCCAGTTGCCAACTCGGTCGCAAGAGACGCTACAATGCCAGCTTATTTGTCCTCTGGGCTGCCTCATTCGCAGTTAGGACATTCTGGTGAACCTCATGGTTGGTTTTATTGTTTGCCTCGCTTCCGGCAGGGATTTACTGCACCTGCTCGAAACTTCACTGCAGAGGAAAAACTTCCTGCTAGCCATGCAAAAGGTTTTAGGGAGGAAATTGCCCCCATTGGGGCGTCCGGTTTCCCTCAGAAGCAATTCCTGGTTATTGATCAAACTGGTGATCAAACAACTCTGGTTTATAGTTCAAGGTTTGGTGGGCCTGTTGAGTGCCTTACTTCCTGGGATTCAAAGCTTCATGGATCTACCAATTTGAACAACGGGAATGAATTGCTATCTTTGAGGAGAGATGTGAATGATATGGTTGGACATGGACCGGCTCTGGATGATAAAGTTGATCAAAATCAGGGAACTGATGATGACATTGAAAGTGAGATGCATGAAGACACAGAGGAAATCAATGCATTGCTTTACTCTGACAGTGATGGTTATTCTACTGAGGACGACGATGATGATGATGAAGTTACTAGCACAGGACATTCACCCAGTACAATGACCACTCACGATAACCAGGAAGAACCTGATAAGGGAACGGCTGAAGAAGTTGCTAGCTCCTTTGGAGAAACAAAGAAGCGAAAGCTGTGGGACGGGGCTTATGATGAGGACATGCACTTCGTGGACACTGCTAGTTCTCTGAATGGGAAAAGACCCTTTGAAGTTGGAGATGATGCAGAATCAAGATGCTCCAGTGTTGGAAACATTAGTAGAGGGTCAGGTGAAGTGGGTTCTTTGTCAGGCAATAAAAAGATGAGAAAGGAGAAGATTCAAGATGTTCTGAGCATTCTGCAATGCATAGTTCCTGGTGGAAAGGACAAGGAGCCAATTGAGCTTCTTGATGAAGCCATACGTTGTTTGAAATCATTGAAACTAAAGGCCATAGAGCTTGGACTTGATGCCATATAA 1137 0.4503 MGENCETWIPELLFDWQSPNLSSFNAAPFGMGKQNGTTAAMNPVANSVARDATMPAYLSSGLPHSQLGHSGEPHGWFYCLPRFRQGFTAPARNFTAEEKLPASHAKGFREEIAPIGASGFPQKQFLVIDQTGDQTTLVYSSRFGGPVECLTSWDSKLHGSTNLNNGNELLSLRRDVNDMVGHGPALDDKVDQNQGTDDDIESEMHEDTEEINALLYSDSDGYSTEDDDDDDEVTSTGHSPSTMTTHDNQEEPDKGTAEEVASSFGETKKRKLWDGAYDEDMHFVDTASSLNGKRPFEVGDDAESRCSSVGNISRGSGEVGSLSGNKKMRKEKIQDVLSILQCIVPGGKDKEPIELLDEAIRCLKSLKLKAIELGLDAI 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01164 378 MobiDBLite consensus disorder prediction 247 265 - -
Spst8g01164 378 MobiDBLite consensus disorder prediction 180 199 - -
Spst8g01164 378 PANTHER TRANSCRIPTION FACTOR BHLH145 9 376 IPR037546 -
Spst8g01164 378 MobiDBLite consensus disorder prediction 180 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01164 Spst-Chr8 10335974 10337110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01164 28 367 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 33.046 1.84e-23 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01164 - - gmx:100812109 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01164 8 10335974 10337110 Spst8g01164 8 10335974 10337110 ECH
Spst8g01164 8 10335974 10337110 Spst9g01072 9 9512087 9513172 PCT