Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01136 ATGAGCGAAGAAGAGAGCAAGGGTTCTGCCTTTCTGGGAACCAACTCCGCTTATTCAGGTTTTCTTCTTGACCCTTCAACATGGGGCGGGCTGAGTTTGCCAGAAAAACAAAGACTAGTACATGAGATTGCTCGACAGTCAAAAGATGCTTCTAGTATGCTTCAAACATTTACACGCAGGGAACTTCTAGAAATAATCTGTGCTGAATTAGGCAAAGAGAGGAAATACACAGGATATACCAAGAGTCAAATGATAGAACATCTTCTGAAGATAATTTCTAAGAACTCCAACTTGCATATCAACGGAAATACGCCTGCTCATTCTCCCACCAAAAGTTGTATTGGATCTAAAAGGAAAAAGAAACCTGCATATGAGGATTTACATCATGCTCCTCTGGGGAACATTAAAGAGGAAATAGTGAAAACCTTTTTGTGTCAAAATGTTGCGTGCAAAGCTACATTGAATCCAGAAGATTCTTTTTGCAAGAGATGTTCTTGTTGCATATGCCATTGCTATGATGATAACAAGGATCCTAGTCTGTGGTTGACCTGCAGCTCTGATCTTCCCAATGATGAGTCATGTGGAATGTCCTGTCATTTGCAATGTGCTTTGAGTAATCAAATGTCTGGCATTCTGAAGGGTAGTTGTGGTATTAAGTTAGATGGAGCCTTCTGTTGTGTTTCTTGTGGAAAAAATAATGAACTGATGAAGACATGGCGAAAACAATTATTAGTTGCCAGAGAAGCAAGAAGAACGGATATACTGTGTTTGCGAATATCCCTGGCCAACAGGATTCTTGTAGGAACAGAAGTGTACAAGGAACTGCAAAAGATTATAGAAACTGCTCTCAAATTACTGGAGAATGAAGTGGGATCACTTGATCATGTATATGCGAGGATGACACGTGGAATTGTTAGCAGGCTTTCATGTGGTGCTGAGGTTCAGAGATTGTGCTCTACTGCAATTGAATGTTTTGATTCAAAGTATTCTGACCATTTCTCTATTTGTGCCGAAAAGAAAGATGCACCAACATGTTCAATTCGTTTTGAAGAGTGCCTTCCTACTTCAGTGGTTATCGTGCTAGAGTACAATGACAAACTTCTAAAGAACTTTCTGGGCTGCAGGCTTTGGCACCGAATATCAACAACAGACTACCCTGAACAACCCACCTTCATTGTCTTGAGGCCTGAGAAAAGATTCAAGTTAGAAAACCTCCATCCCTCAACTGAGTACTTTTGCAAAGCTTCTCTGTTCAGCAGCACAGGAATTTTGGGGGCTGCAGAAGCAAAATGGGTGACACCTTGTGATCCCACCAATTCTGCAAAAGGTATAAGTTGTGGTGGAAATCGTTTTAGATGGTCCCCGCAGAGATCCTCAGGTACCGGAGTGGACATGTGTGCACAGAACCATATAATTGCTGAAACTCATCCCACAGAGTCTGCCAACTCGGACATGAAGTTATCATCTGGACAGCATCCTGGGAAACCCATGATTTTGAACATCAGGGGCAGGTTTGAAGAGTTCCTCTCCAAGCCTCAGTCAATAGACCCTTTTTCATATAAAAATCTTGCTGCAGTTTCACCTTCCACGCCTTCTAAATCCTATGAAATGAGGCAAATTCCTGGTTTGAATTCTAGAAAGCGCTCGAAGGAAAACGACTATGAGTATTCTGTGAGGGTGGTCAAATTGTTGGAGCATCTGGGGCACATAGATGAAATCTTCAGAGTAAGATTTCTCACTTGGTTCAGCCTTAAGGCTACTCAACAGGAGAGAAGGGTGGTTAGTGCTTTTGTTGATGCATTGATTGATGACCCAGCAAGCTTAGCAGACCAGCTCATACACACTTTCAGTGATGAAATATGTTGCGAGCAAAAACCTTTGTGA 1884 0.4188 MSEEESKGSAFLGTNSAYSGFLLDPSTWGGLSLPEKQRLVHEIARQSKDASSMLQTFTRRELLEIICAELGKERKYTGYTKSQMIEHLLKIISKNSNLHINGNTPAHSPTKSCIGSKRKKKPAYEDLHHAPLGNIKEEIVKTFLCQNVACKATLNPEDSFCKRCSCCICHCYDDNKDPSLWLTCSSDLPNDESCGMSCHLQCALSNQMSGILKGSCGIKLDGAFCCVSCGKNNELMKTWRKQLLVAREARRTDILCLRISLANRILVGTEVYKELQKIIETALKLLENEVGSLDHVYARMTRGIVSRLSCGAEVQRLCSTAIECFDSKYSDHFSICAEKKDAPTCSIRFEECLPTSVVIVLEYNDKLLKNFLGCRLWHRISTTDYPEQPTFIVLRPEKRFKLENLHPSTEYFCKASLFSSTGILGAAEAKWVTPCDPTNSAKGISCGGNRFRWSPQRSSGTGVDMCAQNHIIAETHPTESANSDMKLSSGQHPGKPMILNIRGRFEEFLSKPQSIDPFSYKNLAAVSPSTPSKSYEMRQIPGLNSRKRSKENDYEYSVRVVKLLEHLGHIDEIFRVRFLTWFSLKATQQERRVVSAFVDALIDDPASLADQLIHTFSDEICCEQKPL 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01136 627 Pfam PHD - plant homeodomain finger protein 145 263 IPR032881 -
Spst8g01136 627 CDD PHD_VIN3_plant 165 229 - -
Spst8g01136 627 PANTHER VIN3-LIKE PROTEIN 2-RELATED 21 445 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01136 Spst-Chr8 10036141 10040350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01136 31 620 PHD Gene Family AT5G57380 35.149 5.75e-106 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01136 - - gmx:100785502 1142.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01136 8 10036141 10040350 Spst8g01136 8 10036141 10040350 ECH