Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01122 ATGGTTGGCATAGGATGCATGGCGGGAGTAGGAGTATTTCACCCGAGTTGGCAGCATCACCGAATTCGAATCCTCGCTTCAAAATCTGAAGAAGAGGCAGTAAAAGTAGCACGGTGGTGGTCGTTGGTGTCTGCCTCTGCATACGAGACTCATCATCGTTGCCGAGTTAGACCCAGGCTCCGGCGTCCGTGTTGTGTGCCTGACAATAGAGACGCTGGGGAGGAAGGAACCTCTACTTCTGAACGACTAGAGTTAGAATGGAAGCTCCTCACCAGAAGGATTGGAGATTCCGGAATTATTTCTTCGTGTTTGGTCGGTCTCCTCACCGGCGTCGCTGTCGTGCTTTTCAATTATGCTGTCCATGAAATTCGTGATTTGTTCTGGGATGGGATTCCTAATCGAGGCGCCTCATGGTTGAGGGAAGCGCCTATGGAGACAACACGGGCACGAGTAGTACTAGTTCCGGCTTTTGGAGGCGCTATTGTGTCTGTGCTAAACCTCCTTCGTAAGCGTTTTGATTCCGCTCTCCAACAAGACCCTTTCCTCCAAACACCATCTTCCTACCTCAAGTCTGCTTCCCGCCCTTTTCTGAAGGCCATGGCTGCTTCTGTTACTTTAGGCACAGGCAATTCCCTGGGTCCTGAGGGTCCCAGCGTCGACATTGGCACTTCCATTGCCAAAGGCCTTGGTCCTTTCTTTCACAATGGAAAGACTTCTGGCAGAATGCTCTCCCTTGTCGCTGCTGGCTCTGCTGCTGGCCTCTCTGCCGGTTTTAATACTGCTGTCGCTGGTTGTTTTTTTGCTGTTGAGTCTGTCTTGTGGCCATCGCCTGCAGATGCATCTTTACCACTTACAAATAATACTTCCATGGTCATACTAAGTGCTGTCATAGCTTCTGTAGTTTCTGAGATTGGCCTTGGCTCTCAACCAGCCTTTAAAGTTCCAGATTATGACTTCCGCTCCCCCAGTGAAGCTGAGTAA 981 0.5036 MVGIGCMAGVGVFHPSWQHHRIRILASKSEEEAVKVARWWSLVSASAYETHHRCRVRPRLRRPCCVPDNRDAGEEGTSTSERLELEWKLLTRRIGDSGIISSCLVGLLTGVAVVLFNYAVHEIRDLFWDGIPNRGASWLREAPMETTRARVVLVPAFGGAIVSVLNLLRKRFDSALQQDPFLQTPSSYLKSASRPFLKAMAASVTLGTGNSLGPEGPSVDIGTSIAKGLGPFFHNGKTSGRMLSLVAAGSAAGLSAGFNTAVAGCFFAVESVLWPSPADASLPLTNNTSMVILSAVIASVVSEIGLGSQPAFKVPDYDFRSPSEAE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01122 326 PRINTS Chloride channel signature 198 217 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Spst8g01122 326 PRINTS Chloride channel signature 251 270 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Spst8g01122 326 PANTHER CHLORIDE CHANNEL PROTEIN CLC-E 91 324 - -
Spst8g01122 326 SUPERFAMILY Clc chloride channel 89 322 IPR014743 -
Spst8g01122 326 CDD Voltage_gated_ClC 106 324 - -
Spst8g01122 326 Pfam Voltage gated chloride channel 191 315 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Spst8g01122 326 Gene3D Clc chloride channel 96 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01122 Spst-Chr8 9710214 9712647 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01122 102 272 Ion Channels AT3G27170 28.061 2.19e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01122 K03281 - gmx:100812959 493.426