Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01118 ATGGGCAACACATGCCGCGGATCTTTGAAAGGGAAATATATTCAGGGCTTCAGCCAGCCCGAAGACCACTCCAAGCGCACCACCCTTTCTGATCGCCCCGACTCCGAACACCCCTCCTCAGCCAAACCAAATATCAATTCTGTAGAAAACAATATCATAGTCAACGACGACAACAACAACAACAACAACAACAACAATCTACCCTTCAACTCCAAGAAAGACTCCACCATGCGCCGCGGCCTCGACAACCAAGCATATTATGTCTTGGGCCATAAGACTCCCAACATTCGTGATCTGTACACTCTTGGCCGCAAATTGGGACAGGGACAATTTGGCACCACTTATTTATGTACCGAGAATTCTACCTCCATCGAATATGCCTGCAAATCCATCTCCAAAAGGAAGTTGATTTCCAAGGAGGACGTCGAGGACGTTAGGAGGGAAATTCAGATAATGCATCATTTAGCTGGTCACAGTAACATTGTCACCATCAAGGGTGCTTACGAGGATCCTCTCTATGTTCATATTGTCATGGAGCTTTGTTCTGGGGGTGAGTTGTTTGATCGCATCATCCAGAGGGGCCACTATACCGAGAGAAAGGCTGCAGAGTTGACCAAAATTATTGTTGGGGTTGTTGAGGCTTGTCATTCCCTTGGGGTCATGCATAGAGATCTCAAGCCCGAAAACTTTTTGTTGGTCAATAAAGATGATGATTTCTCTCTTAAAGCAATTGACTTCGGCCTCTCCGTTTTCTTCAAACCCGGTCAAATTTTCACTGATGTCGTGGGCAGCCCGTACTATGTTGCTCCTGAGGTTCTCCTCAAGCATTATGGGCCTGAAGCAGATGTGTGGACAGCGGGTGTCATACTGTACATATTGCTTAGTGGTGTACCACCATTTTGGGCAGAGACCCAGCAGGGTATATTTGATGCAGTCTTGAAGGGACATATAGATTTTGACTCAGAACCTTGGCCTCTAATATCTGACAGTGGAAAAGATCTCATTAGAAAGATGCTGTGTTCTCAGCCTTCAGAACGGTTGACTGCTCATCAAGTGTTATGTCATCCTTGGATATGTGAAAATGGAGTTGCACCTGACAGGGCAATAGACCCTGCTGTTCTTTCTCGTCTCAAACAGTTTTCTGCAATGAATAAGCTAAAGAAGATGGCGTTGCGGGTGATTGCTGAAAGTCTATCCGAAGAGGAGATTGCTGGTTTGAGAGAAATGTTTCAGGCTATGGATACCGATAACAGTGGTGCAATCACATTTGATGAACTCAAAGCTGGTCTAAGAAGATATGGGTCTACCCTTAAAGATATAGAAATACGTGATCTAATGGAAGCGGCTGATGTGGACAAAAGTGGAACCATAGATTATGGGGAGTTTATTGCTGCAACAGTTCATCTCAACAAACTAGAGCGTGAAGAACATCTTATCGCAGCATTCCGATATTTTGATAAGGATGGTAGTGGTTATATTACAGTTGATGAACTTCAACAAGCTTGTGCAGAACATAACATGACTGATGCTTTTCTTGAAGATATTATTAGAGAAGTTGATCAAGATAATGATGGAAGGATTGATTATGGTGAATTTGCTGCCATGATGCAAAAAGGCAATGCTGGAATTGGTAGGAGGACTATGCGCAACAGTCTGAATTTAAGCATGAGAGATGCACCAAGTTCTCAATAG 1692 0.4385 MGNTCRGSLKGKYIQGFSQPEDHSKRTTLSDRPDSEHPSSAKPNINSVENNIIVNDDNNNNNNNNNLPFNSKKDSTMRRGLDNQAYYVLGHKTPNIRDLYTLGRKLGQGQFGTTYLCTENSTSIEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHSNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYTERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFDSEPWPLISDSGKDLIRKMLCSQPSERLTAHQVLCHPWICENGVAPDRAIDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQAMDTDNSGAITFDELKAGLRRYGSTLKDIEIRDLMEAADVDKSGTIDYGEFIAATVHLNKLEREEHLIAAFRYFDKDGSGYITVDELQQACAEHNMTDAFLEDIIREVDQDNDGRIDYGEFAAMMQKGNAGIGRRTMRNSLNLSMRDAPSSQ 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01118 563 FunFam Calcium-dependent protein kinase 1 102 185 - -
Spst8g01118 563 ProSitePatterns EF-hand calcium-binding domain. 450 462 IPR018247 -
Spst8g01118 563 Pfam EF-hand domain pair 406 466 IPR002048 GO:0005509
Spst8g01118 563 Pfam EF-hand domain pair 476 537 IPR002048 GO:0005509
Spst8g01118 563 ProSitePatterns Protein kinases ATP-binding region signature. 106 129 IPR017441 GO:0005524
Spst8g01118 563 MobiDBLite consensus disorder prediction 24 38 - -
Spst8g01118 563 FunFam Calcium-dependent protein kinase 5 186 366 - -
Spst8g01118 563 FunFam Calcium-dependent protein kinase 1 366 540 - -
Spst8g01118 563 ProSiteProfiles Protein kinase domain profile. 100 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01118 563 MobiDBLite consensus disorder prediction 1 76 - -
Spst8g01118 563 ProSiteProfiles EF-hand calcium-binding domain profile. 509 542 IPR002048 GO:0005509
Spst8g01118 563 ProSitePatterns EF-hand calcium-binding domain. 486 498 IPR018247 -
Spst8g01118 563 ProSitePatterns EF-hand calcium-binding domain. 520 532 IPR018247 -
Spst8g01118 563 PANTHER SERINE/THREONINE-PROTEIN KINASE 89 532 - -
Spst8g01118 563 ProSiteProfiles EF-hand calcium-binding domain profile. 437 472 IPR002048 GO:0005509
Spst8g01118 563 SUPERFAMILY EF-hand 382 539 IPR011992 -
Spst8g01118 563 SUPERFAMILY Protein kinase-like (PK-like) 81 382 IPR011009 -
Spst8g01118 563 SMART serkin_6 100 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01118 563 Gene3D - 368 540 - -
Spst8g01118 563 ProSiteProfiles EF-hand calcium-binding domain profile. 401 436 IPR002048 GO:0005509
Spst8g01118 563 MobiDBLite consensus disorder prediction 39 73 - -
Spst8g01118 563 Gene3D Transferase(Phosphotransferase) domain 1 186 367 - -
Spst8g01118 563 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Spst8g01118 563 CDD STKc_CAMK 100 357 - -
Spst8g01118 563 SMART efh_1 477 505 IPR002048 GO:0005509
Spst8g01118 563 SMART efh_1 511 539 IPR002048 GO:0005509
Spst8g01118 563 SMART efh_1 405 433 IPR002048 GO:0005509
Spst8g01118 563 SMART efh_1 441 469 IPR002048 GO:0005509
Spst8g01118 563 CDD EFh 477 537 IPR002048 GO:0005509
Spst8g01118 563 Pfam Protein kinase domain 100 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01118 563 ProSiteProfiles EF-hand calcium-binding domain profile. 473 508 IPR002048 GO:0005509
Spst8g01118 563 ProSitePatterns EF-hand calcium-binding domain. 414 426 IPR018247 -
Spst8g01118 563 Gene3D Phosphorylase Kinase; domain 1 102 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01118 Spst-Chr8 9671127 9676010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01118 1 559 EF-hand Containing Proteins AT2G17290 81.964 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst8g01118 Pkinase 1.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01118 K13412 - gmx:100778173 1040.8