Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01115 ATGAATCTTCTATTCTTTGCATTAACATTGATCCTATTACATGGATCATCAAGAGCAAGAGAAGAAGCTTCCGGACATGATCATGATGTCGTCAAAATCGGTGCCATATTCACACTGAAAACTATAAACGGACAGGTTTCCAAAATTGCCATCCAAGCTGCTGAGAAAGATGTGAATGCTGATCCTCGCATCATGGGGGGACGTAAATTGTCCATAAACATCCATGATTCCAACTTCAGTGGCTTTCTTGGCTTCATTGGGGCCCTCAAGTTCTTGATGACCGACACTGTAGCTATAATCGGTCCACAAGCTTCGGTCATGGCTCATGTGCTTTCACATCTCGCAAAGGAGCTCCATGTTCCCTTACTTTCCTTCACGGCTCTGGATCCCACGCTCACACCTCTCCAGTATCCTTATTTCGTCCAGACAGCACCCAGCGATCTGTTCCAGATGACTGCAGTTGCAGACATGATTAGTTATTTTGGCTGGAGAGAAGTCATAGCAGTATTCAGTGATGATGATCAGAGTCGAAATGGGATAACTGTTTTGGGGGATAAACTTGCAGAGAGACGCTGTAAGTTGTCTTACAAAGCAGCACTGCCTCCTGATCCAACCGCCACTCCAAGCTTTGTTACCAGTCAGTTACTGAAGATTAAAAGTATGGAGTCTCGAATAATCGTTTTACACACCTTCGCCAAAACTGGTCTCTTGGTTTTAGACGTGGCTCAGAAACTAGAAATGATGGGCAAAGGGTATGTCTGGATAGCTACTACTTGGTTATCAACTGTTTTAGATTCAACTTCTGCTCCACTACCTTCAGACAATTCTACCTCAATTCTAGGAGTTCTTACCCTTCGCCCTCATACCCCTCAATCCATAAAAAAACAGGCATTCATCTCGAGGTGGAAACACATAAGTAATGGCTCAATTGGGTTAAATCCATACGGACTCTATGCATATGATTCTGTCTGGATAATTGCTCAGGCACTAAAATTATTTTTTGAACAGAATCGAACCGTTTCATTTTCTAACAACACAAAGTTAAGTAGTACGAGGGAAGAGGCTCTGGATCTGGGTGCTTTGAGCGTTTTTGATGGAGGGAAGCAGCTACTTGATAACATTTTGCGCATTAATATGACTGGATTGACTGGACCTATTCACTTTGGTTCAGATAGATCTCCTCCACATCCATCATATGACATCATTAATGTAATTGCTACAGGTTTTCGGAGCATCGGTTACTGGTCTAATTACTCTGGACTCTCAGTAATAACCCCTGAGAAACTTCAGAAGAAGCCTGCCAATCGTTCAATTTCAAGCCAGCATCTAAAGCATGTTATATGGCCTGGAAATACTGCAGAAAAACCTCGTGGATGGATTTTCCCAAATAATGGGAGGAAACTGAGAATTGGAGTTCCCAACAGAGTTAGTTATAGAGACATAGTCTCACAAATGAATGGCACAAATGCAGTTCAAGGATATTGCATAGATATATTCCTAGCTGCCATAAAATTGCTTGCATATCCAGTTCAGTATAAGTTCATTCTGTTTGGAGATGGAAAAAATAACCCAAACTACTACGATCTTGTCAACATGATTACTTCTGATGGTTTTGATGCTGTTGTAGGTGACATTGCTATTGTCACTGACCGAACAAAGATTGTGGATTTTACTCAACCATATATAGAATCGGGGCTAGTTGTGGTTGCTCCGGTAAAAAAATTGAAGTCACATGCTTGGGCTTTCTTGCGGCCATTTACTCCAGTGATGTGGGGTGTCACTGCATTTTTTTTCCTCTTTGTTGGAGCAGTGGTGTGGATTCTTGAACATAGATCAAACGATGAGTTTCGGGGGCCGCCAAAGGAACAGATAGTTACAGTCCTTTGGTTTAGTTTCTCAACCATGTTTTTTGCACACAGAGAAAACACAGTCAGTCCACTTGGTCGAATTGTGTTGATAATCTGGCTTTTTGTGGTTCTGATAATCAATTCAAGCTACACTGCAAGCTTGACATCAATTCTCACCGTGCAGCAGCTGTCTTCCCCCATAACAGGAATTGATAGCTTGATATCCAGCAGTGAACGTATAGGGTTCCAAGTAGGCTCGTTTGCTGCAAACTATCTCACTGAGCAACTCAATATCCCCAAAAATAGACTTGTTCCTCTTGGCTCACCAGAAGAATATGCCGTTGCCCTTGAAAGGGGAACTGTTGCAGCTGTGGTGGATGAACGGCCATACGTAGAACTCTTCCTTTCAAACCGCTGCAAATTCTCAATCAGGGGCCAAGAGTTCACCAAAAGTGGATGGGGATTTGCATTCCCAAGGGACTCTCCTTTTGCAATTGATATGTCAACTGCCATTTTAACTCTATCTGAGAATGGTGAACTTCAGAGGATCCATGAAAAGTGGCTTTCAGAGAAGGCTTGCCATTATCACAGCAGTGAGGATGAACAACTTCAATTAAATAGCTTCCGGGGACTGTTTGTGATATGTGGAATAACATGTTTCGTGGCGCTTCTAATATACTTTTTATCAATGCTGCACCAATTTGGTAAAAAATCCCTTCAGAAAGCTGGTCCTTCTGATCGTTACAGCTTGCCTTCTGCACGCATCCAAACATTTCTACATTTTGTTGATGAGAAAGAAGAAGTATCTCCCAAGAAATTAAAAAGAAAACTGGAAAGTATTTCATCGAATCGTTTGAGGAGCATATCCAAGACCAAGAGCAAGACTCAGAGAGTGCAGGTGGACATTTCCTAA 2760 0.4214 MNLLFFALTLILLHGSSRAREEASGHDHDVVKIGAIFTLKTINGQVSKIAIQAAEKDVNADPRIMGGRKLSINIHDSNFSGFLGFIGALKFLMTDTVAIIGPQASVMAHVLSHLAKELHVPLLSFTALDPTLTPLQYPYFVQTAPSDLFQMTAVADMISYFGWREVIAVFSDDDQSRNGITVLGDKLAERRCKLSYKAALPPDPTATPSFVTSQLLKIKSMESRIIVLHTFAKTGLLVLDVAQKLEMMGKGYVWIATTWLSTVLDSTSAPLPSDNSTSILGVLTLRPHTPQSIKKQAFISRWKHISNGSIGLNPYGLYAYDSVWIIAQALKLFFEQNRTVSFSNNTKLSSTREEALDLGALSVFDGGKQLLDNILRINMTGLTGPIHFGSDRSPPHPSYDIINVIATGFRSIGYWSNYSGLSVITPEKLQKKPANRSISSQHLKHVIWPGNTAEKPRGWIFPNNGRKLRIGVPNRVSYRDIVSQMNGTNAVQGYCIDIFLAAIKLLAYPVQYKFILFGDGKNNPNYYDLVNMITSDGFDAVVGDIAIVTDRTKIVDFTQPYIESGLVVVAPVKKLKSHAWAFLRPFTPVMWGVTAFFFLFVGAVVWILEHRSNDEFRGPPKEQIVTVLWFSFSTMFFAHRENTVSPLGRIVLIIWLFVVLIINSSYTASLTSILTVQQLSSPITGIDSLISSSERIGFQVGSFAANYLTEQLNIPKNRLVPLGSPEEYAVALERGTVAAVVDERPYVELFLSNRCKFSIRGQEFTKSGWGFAFPRDSPFAIDMSTAILTLSENGELQRIHEKWLSEKACHYHSSEDEQLQLNSFRGLFVICGITCFVALLIYFLSMLHQFGKKSLQKAGPSDRYSLPSARIQTFLHFVDEKEEVSPKKLKRKLESISSNRLRSISKTKSKTQRVQVDIS 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01115 919 FunFam Glutamate receptor 463 579 - -
Spst8g01115 919 Pfam Bacterial extracellular solute-binding proteins, family 3 485 805 IPR001638 -
Spst8g01115 919 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 880 IPR015683 -
Spst8g01115 919 Gene3D - 146 421 - -
Spst8g01115 919 PIRSF IGluLR_plant 1 918 IPR017103 -
Spst8g01115 919 FunFam Glutamate receptor 579 709 - -
Spst8g01115 919 FunFam Glutamate receptor 146 307 - -
Spst8g01115 919 SMART AABind_6 467 807 IPR001638 -
Spst8g01115 919 CDD GluR_Plant 466 804 - -
Spst8g01115 919 Gene3D - 767 803 - -
Spst8g01115 919 FunFam Glutamate receptor 705 808 - -
Spst8g01115 919 CDD PBP1_GABAb_receptor_plant 32 423 IPR044440 -
Spst8g01115 919 Gene3D - 459 578 - -
Spst8g01115 919 SUPERFAMILY Periplasmic binding protein-like II 445 806 - -
Spst8g01115 919 SMART GluR_14 467 806 IPR001320 GO:0015276|GO:0016020
Spst8g01115 919 Gene3D - 579 714 - -
Spst8g01115 919 SUPERFAMILY Periplasmic binding protein-like I 28 459 IPR028082 -
Spst8g01115 919 Gene3D - 739 766 - -
Spst8g01115 919 Gene3D - 49 396 - -
Spst8g01115 919 Pfam Ligand-gated ion channel 806 834 IPR001320 GO:0015276|GO:0016020
Spst8g01115 919 Pfam Receptor family ligand binding region 49 404 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01115 Spst-Chr8 9655489 9659017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01115 21 910 Ion Channels AT2G17260 62.279 0.0 1141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01115 K05387 - gmx:100793969 1332.39