Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01104 ATGGGTTGCTGCCAATCGTCGATGCTGCTGAGAGTGGGGGAGAGGGAGACTCACCCGGAAAGGGAAAGGGAAAAGGAAAAGGAAAGGGAAAGGGAAAAGGAAAAGGAAAAAGAGCAAGCATACGGAAACCAGCAGAGGGCGTGTGTGGAGGGGGAGCGGGAGAAAGAAGGGGTGGATTTCTCCTTCACGGAGTTCTCGCTGCCGGAGTTGAAGGGGGCCACCAACAATTTCAGCTCAGAGTATATCGTCTCTGAGAGTGGGGAGAAGGCGCCCAACCTCGTCTACAAGGGTCGCCTCCAGAACCAGAGCCGTTGGATTGCGGTCAAGAAGTTCAGCAAGGCAGCCTGGCCGGATCCCAAGCAGTTCGTCGAAGAGGCTTCCGGCGTAGGCAAGTTGCGCCACCCGAGGCTCGCTAATTTAATCGGTTACTGCTGCGACGGCGATGAGAGGCTCCTCGTTGCCGAGTACATGCCCTATGACACTCTCGCCAAGCATCTCTTCCACTGGGAAACTCAAACTATTGAGTGGGCCATGCGCTTGCGGGTGGCTCTGTACATCGCACAGGCTTTGCATTATTGCAGTTCAGAGGGGCGTCCCTTGTACCACGACTTGAATGCTTACCGTGTTCTCTTCGACCAGGAAGGTGATCCTCGTCTCTCTTGTTTCGGTTTTATGAAGAACAGCAGGGATGGCAAGAGTTATAGCACCAATCTCGCTTATACACCTCCTGAATATTTAAGAAACGGAAGGGTCACTCCTGAAAGTGTCATTTACAGCTTCGGAACCGTCCTTCTAGACCTCCTCAGCGGCAAGCACATCCCTCCCAGTCATGCACTTGATATGATACAGGGGAAGAACATTATGCTCTTAATGGATTCGCATTTGGAGGGAAAGTTTTCAACAGAAGAAGCAACAGTAGTTGTTAATCTTGCCTCTAAATGTTTGCAATATGAACCGAGGGAGCGGCCTGATACCAAGGATTTGGTCACAACACTGGCCCCATTGCATACAAAACCCAATGTGCGTTCTGATATCATGCTTGGAATTCCAAAGCACGAGGAAGCACCATCAACTCCACAACGTCCTCTTTCAGCAATGGGAGAGGCTTGTTCAAGAATGGACCTAACTGCAATACATCAGATCTTGGTTGCGACACACTACAGAGACGATGAAGGAACTAATGAGCTGTCGTTCCAAGAGTGGACTCAACAGATGAGAGATATGCTGGAGGCAAGGAAGCGTGGAGACTATGCATTCCGTGACAAAGACTTCAAGACAGCCATTGATAACTACTCCCAGTTTATTGATGTGGGAACGATGGTCTCCCCAACTGTTTTTGCAAGACGCAGTCTATGCTATCTGTTATGTGATCAACCAGATCCTGCGCTACGCGATGCAATGCAAGCACAGTGTGTTTATCCGGACTGGCCAACGGCTTTCTACATGCAATCAGTTGCTCTTGCAAAGCTGGACATGCACAAGGATGCTGCTGATATGTTAAATGAGGCAGCTGCATTGGAAGAGAAGAGACAAAGAGGAGCGAGAGGATCATAA 1554 0.4994 MGCCQSSMLLRVGERETHPEREREKEKEREREKEKEKEQAYGNQQRACVEGEREKEGVDFSFTEFSLPELKGATNNFSSEYIVSESGEKAPNLVYKGRLQNQSRWIAVKKFSKAAWPDPKQFVEEASGVGKLRHPRLANLIGYCCDGDERLLVAEYMPYDTLAKHLFHWETQTIEWAMRLRVALYIAQALHYCSSEGRPLYHDLNAYRVLFDQEGDPRLSCFGFMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDMIQGKNIMLLMDSHLEGKFSTEEATVVVNLASKCLQYEPRERPDTKDLVTTLAPLHTKPNVRSDIMLGIPKHEEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMHKDAADMLNEAAALEEKRQRGARGS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01104 517 SUPERFAMILY Protein kinase-like (PK-like) 61 335 IPR011009 -
Spst8g01104 517 FunFam probable serine/threonine-protein kinase At4g35230 406 515 - -
Spst8g01104 517 Coils Coil 23 43 - -
Spst8g01104 517 SUPERFAMILY TPR-like 409 510 IPR011990 GO:0005515
Spst8g01104 517 Gene3D Transferase(Phosphotransferase) domain 1 158 349 - -
Spst8g01104 517 MobiDBLite consensus disorder prediction 1 48 - -
Spst8g01104 517 ProSiteProfiles Protein kinase domain profile. 80 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01104 517 Gene3D Tetratricopeptide repeat domain 406 515 IPR011990 GO:0005515
Spst8g01104 517 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 32 512 IPR045845 GO:0004672|GO:0009742
Spst8g01104 517 MobiDBLite consensus disorder prediction 13 41 - -
Spst8g01104 517 Gene3D Phosphorylase Kinase; domain 1 51 156 - -
Spst8g01104 517 FunFam probable serine/threonine-protein kinase At4g35230 52 156 - -
Spst8g01104 517 Pfam Protein tyrosine and serine/threonine kinase 94 332 IPR001245 GO:0004672|GO:0006468
Spst8g01104 517 FunFam probable serine/threonine-protein kinase At5g41260 158 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01104 Spst-Chr8 9531892 9544387 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01104 65 356 Glycoside Hydrolase AT3G07070 34.713 3.27e-47 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Spst8g01104 PK_Tyr_Ser-Thr 6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01104 K14500 - gmx:100808907 963.37