Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01094 ATGACAAATTCATCCTTCAAAAATTTCCACGTGGGTAGAGTTAAGAGTAAAGAGAAAGGTGGCCATTATCCACAGCAGGAAGGGGTGAGATTACATTACATTGAGAAGAAAATATCCATCCCTTATCCGATTCATCACATTACGTGTACACACTTGGTTGGAGAAGTAGATCATAATCTCATCCTCACTACATTGCGCCATGCAATATCCACCAGGAGTTCGAAACTGCTCGTACCTGCGGGCCAAAGTAGTGGCTCAGCGTACTCCATGCCTTCTACCCCTTTGCTTTTTAGTGGTTGCAATAGATATCATTCGTTCCTAACCGTTCACAATTCACATTTACAACAATACTCTCTTTCCCGCACCAATTGCAGACGCCACAAAGGAGTAGTCACCAACATGGCTGCACAAGCTCTTGTATCATCTTCATCTCTTACCTTCTCAGCGGAGGCTGCCAGACAGAGTCTTGGACCAAGATCACTCCAATCTCCTATTGGCTTCTCCAGAAAAGCCTCCTTCATTGTTAAGGCAGCTTCTACTCCCCCTGTCAAGCAAGGAGCAGACAGACCTTTATGGTTTGCATCAAAGCAAAGTCTTTCTTACTTGGATGGCAGCCTTCCCGGTGACTATGGATTCGACCCTCTGGGGCTTTCAGACCCTGAAGGAACAGGAGGGTTCATCGAGCCCAAATGGCTAGCATATGGTGAGGTCATCAATGGTCGTTTTGCAATGTTGGGAGCAGTTGGGTCCATAGCACCTGAAATTCTTGGCAAGGCTGGTCTGATCCCTCAGGAGACAGCACTCCCATGGTTCAGAACCGGTGTGTTCCCTCCTGCAGGAACATACAACTACTGGGCAGACTCCTACACACTCTTTGTGTTTGAGCTGGCGCTTATGGGGTTTGCAGAGCACAGAAGATTCCAAGATTGGGCCAAACCAGGGTCTATGGGCAAACAGTACTTCTTAGGACTAGAGAAAGGTCTTGGAGGTTCTGGTGAGCCAGCATACCCCGGAGGACCTTTCTTTAACCCTCTTGGTTTTGGGAAGGATGAAAAGTCCTTGAAGGATTTGAAGCTGAAGGAAGTGAAGAATGGAAGGTTGGCTATGTTGGCAATCTTGGGTTACTTTGTTCAAGCTCTGGTGACAGGTGTTGGCCCATACCAAAACCTCCTAGATCATCTGGCTGACCCCGTGCACAACAACGTCTTGACCAGTCTCAAGTTCCACTAA 1230 0.4748 MTNSSFKNFHVGRVKSKEKGGHYPQQEGVRLHYIEKKISIPYPIHHITCTHLVGEVDHNLILTTLRHAISTRSSKLLVPAGQSSGSAYSMPSTPLLFSGCNRYHSFLTVHNSHLQQYSLSRTNCRRHKGVVTNMAAQALVSSSSLTFSAEAARQSLGPRSLQSPIGFSRKASFIVKAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAVGSIAPEILGKAGLIPQETALPWFRTGVFPPAGTYNYWADSYTLFVFELALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLLDHLADPVHNNVLTSLKFH 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01094 409 Pfam Chlorophyll A-B binding protein 200 379 IPR022796 -
Spst8g01094 409 FunFam Chlorophyll a-b binding protein, chloroplastic 190 408 - -
Spst8g01094 409 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 141 404 IPR001344 GO:0009765|GO:0016020
Spst8g01094 409 SUPERFAMILY Chlorophyll a-b binding protein 188 405 - -
Spst8g01094 409 Gene3D Chlorophyll a/b binding protein domain 191 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01094 Spst-Chr8 9457497 9459578 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01094 134 409 Chloroplast and Mitochondria Gene Families AT1G61520 83.696 4.15e-164 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01094 K08909 - gmx:100808379 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01094 8 9457497 9459578 Spst8g01094 8 9457497 9459578 ECH