Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01091 ATGGCAAACATTACTTCACAAAATGATAGTGAAAGTGAATTGTGTGCGAGTAACACAGACCCCCTTACCCTTAGCTGGAGTGAGGCAGCGGATTCACTTAAGGGTAGTCACTTGGAGGAAGTAAAAGGGATGGTGGCAGAATACCGGAAGGGAGTGATCTGTGTGGGTGGGGGGCAGAGTCTGACCATATCACAGGTAGCTGCTGTTGCTAATCGTTACTCCCAGGCCAAGGTTGAACTCTCAGAGTCCGCAAGGGCAGGCGTTGAAGCTAGCTGCGAGTGGATCGTGGATAACATTAACAAAGGCACTCCCATTTATGGTGTTACCACTGGCTTTGGTGCTGCCTCCTACAGGCAAACTCAAGAAGGCTTTGCTCTTCAGAAGGAAATGGTTAGGTTTTTAAATTGCGCAATATTTGGCTACGAAACAGAGTTGTCTCATACACTGCCAAAATCAGCAACCAGAGCAGCAATGCTTGTGAGGGTTAATACCCTTCTTCAAGGGTATTCGGGAATTAGATTTGAAATCTTGGAAGCTATCACCAAACTCCTCAACCACAATGTCACCCCTATCTTGCCATTACGTGGTACAATTACTGCGTCTGGTGATCTAATTCCTCTGTCCTACATTGCTGCATTGCTAACCGGTAGGCGAAATAGTAAAGCTGTTGGACCCTCCGGGGAGTCCCTCAATGCTAAGGAAGCTTTCCATTTAGCAGGTCTACATTGTGGGTTCTTTGAGTTGAAGCCCAAGGAAGGTCTTGCCCTCGTAAATGGCACAGCCGTTGGGTCTGGCGTAGCTTCTATCGTGCTTTTTGAGGCAAACATATTAGCATTATTGGCAGAAGTTCTATCAGCAGTCTTTGCGGAAGTCATGCAGGGGAAACCCGAATTTACACATCACCTTATACATAAGTTGAAGTACCATCCCGGTCAAATTGAAGCTGCCGCTATTATGGAACACATTCTAGATGGAAGCTCTTATGTCAAGAATGCTAAACTGCAACCGCCAGATCCGTTGCAGAAGCCTAAAAAAGATCGTTATGCTCTTGTAACTTCTCCTCAGTGGCTTGGTCCACAGATTGAAATCATCCGGTTTTCAACCAAATCAATTGAAAGGGAAATAAACTCAGTAAATGACAATCCCTTGATTGATGTCAAGGGGAATAAGGCTCTGAATGGTGGTAATTTTCAAGGCACCCCAATTGGAGTTTCAATGGATAATGCACGTTTGGCTGTTGCTTCAATTGGCAAACTCATCTTTGCCCAATTTACTGAACTAGTCAATGATTTGTATAATAATGGGCTGCCATCAAGTCTCTCTGTTGGTAGAAACCCATCTCTGGATTATGGTTTTAAGGCATCTGACGTTGCCATGGCAGCTTATTGTTCTGAACTTCAATATCTAGCAAATCCGGTAACAAGCCATGTGCAAAGTGCTGAGCAGCACAACCAAGATGTTAATTCTTTGGGCTTAATTTCGGCTTTGAAAACTGTCGAAGCCCTAGAGATATTAAAGCTCATGTCTTCCACTTATCTGGTTGCACTCTGCCAAGCTATTGACTTGAGGCATTTGGAGGAAATTTTCAAGAACACAGTCAAGAATACTGTAAGCAGAGTTGCACTGAAAACATTAATTACTGAAGACAAAGAAGAAATTAATCCATTTCGACTTTGTGAGAAAGATTTGCTTAAAGTGGTCGATAGAGAATATGTATTTTCATACATTGATGATCCCTCAAATGCTACGTACCCATTGTTGTCAAAACTAAAGCAAGTACTTTATGAGCAAGCACACATCAGTGTCATCAATGACAAGAATGTGAGTTTGTTAGTTTTTGAGAAAATTGGAACTTTTGAGGATGAATTGAAGTCGCTCTTGCCAAAGGAAGTTGAAAGAGCACGGGTGACTTACGAGAATGGCAATCCAGCAATTCCAAACAGAATTAAGGAGTGCAGGTCATATCCACTGTACAAATTTGTGAGGGAGGAGTTAGAGATAGGGTTGCTCACCGGAGAAAAAACTCTCTCACCAGATGAGGAATTTGAAAAAGTATATACAGCCATGTGTCAAGCAAAAATTATTGACCCAGTCCTGGAATGTTTAGGAGATTGGAACGGGGTTCCCATCCCAATATAG 2139 0.4292 MANITSQNDSESELCASNTDPLTLSWSEAADSLKGSHLEEVKGMVAEYRKGVICVGGGQSLTISQVAAVANRYSQAKVELSESARAGVEASCEWIVDNINKGTPIYGVTTGFGAASYRQTQEGFALQKEMVRFLNCAIFGYETELSHTLPKSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNVTPILPLRGTITASGDLIPLSYIAALLTGRRNSKAVGPSGESLNAKEAFHLAGLHCGFFELKPKEGLALVNGTAVGSGVASIVLFEANILALLAEVLSAVFAEVMQGKPEFTHHLIHKLKYHPGQIEAAAIMEHILDGSSYVKNAKLQPPDPLQKPKKDRYALVTSPQWLGPQIEIIRFSTKSIEREINSVNDNPLIDVKGNKALNGGNFQGTPIGVSMDNARLAVASIGKLIFAQFTELVNDLYNNGLPSSLSVGRNPSLDYGFKASDVAMAAYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISALKTVEALEILKLMSSTYLVALCQAIDLRHLEEIFKNTVKNTVSRVALKTLITEDKEEINPFRLCEKDLLKVVDREYVFSYIDDPSNATYPLLSKLKQVLYEQAHISVINDKNVSLLVFEKIGTFEDELKSLLPKEVERARVTYENGNPAIPNRIKECRSYPLYKFVREELEIGLLTGEKTLSPDEEFEKVYTAMCQAKIIDPVLECLGDWNGVPIPI 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01091 712 SUPERFAMILY L-aspartase-like 24 712 IPR008948 GO:0003824
Spst8g01091 712 Gene3D - 526 647 IPR023144 -
Spst8g01091 712 CDD PAL-HAL 59 523 IPR001106 -
Spst8g01091 712 Gene3D - 13 260 IPR024083 -
Spst8g01091 712 PANTHER HISTIDINE AMMONIA-LYASE 23 712 IPR001106 -
Spst8g01091 712 FunFam Phenylalanine ammonia-lyase 11 260 - -
Spst8g01091 712 Gene3D Fumarase/aspartase (Central domain) 261 707 - -
Spst8g01091 712 NCBIfam phenylalanine ammonia-lyase 23 702 IPR005922 GO:0005737|GO:0006559|GO:0016841
Spst8g01091 712 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 196 212 IPR022313 GO:0016841
Spst8g01091 712 Pfam Aromatic amino acid lyase 61 526 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01091 Spst-Chr8 9449820 9452269 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01091 20 712 Monolignol Biosynthesis Gene Families AT2G37040 72.190 0.0 1051
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01091 K10775 - gmx:100787872 1240.33