Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01089 ATGGAAGAGAAGCCGGAGCTGTCTTGTGACGCGGAAGGCGTATGCCTGTGCTGCAAACAGACCCCTCCTCCCTCGGAGCTCCTCCCCTGCCACACCTGCGAAGCTAAGTGGCACCTTCCTTGCCTCCCCTCGCCCCCTGTCTCCAGCTCCGACTCCCATTGGGACTGTCCTGATTGCACCGGCCTTTCCTGCCAAAAAGCGGTTCCGGAGTCTACCATTGTCTCCGCTATCCGCACTGTTCATGCCGACTCTTCTCTCACTGAAAAGCAAAAGGCCAGAAAGTGCCAAGAACTGGTGGGCGGGGTGCCCCAGCCTTCCGAGGATGAAAATCATGAAAATATCTTTGATGGAACCTTGAATTGTACTATCTGCAACCAACTACCAGATAGACCAGTGACGGTTGGTTCATCTCTTCTCCTTAACCAATAA 429 0.5408 MEEKPELSCDAEGVCLCCKQTPPPSELLPCHTCEAKWHLPCLPSPPVSSSDSHWDCPDCTGLSCQKAVPESTIVSAIRTVHADSSLTEKQKARKCQELVGGVPQPSEDENHENIFDGTLNCTICNQLPDRPVTVGSSLLLNQ 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01089 142 ProSitePatterns Zinc finger PHD-type signature. 15 59 IPR019786 -
Spst8g01089 142 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 87 IPR013083 -
Spst8g01089 142 ProSiteProfiles Zinc finger PHD-type profile. 12 62 IPR019787 -
Spst8g01089 142 SUPERFAMILY FYVE/PHD zinc finger 5 60 IPR011011 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01089 1 133 C2H2 Transcription Factor Family AT5G39550 39.860 9.92e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01089 K10638 - gmx:100781044 150.214