Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01057 ATGCAGGCATCAGAGCAACATAGAAGTTCAAGCATGTACTATCAACCATTACAACAAATTGAAACCTACTGCTTGCCGCAGTATCGGACAATAAATCAACAGCTGTACTACCATGATGGAGGCCATGGAACTCACTTTTCAACTCCAAGTTCTTCTGAACTTTACTGTACGTTGGAGTCATCTTCTGTAGCTGGCAGTTTCACTCTTTACAACTCGCCTTCAACTGTTAGTTTCTCACCTAATAGTAGCCCCATATCGCAGCAAGACTCTCAGTCATATCCAACTGACCAGTATCATTCCCCTGAGAATACCTATGGCTCTCCATTGAGTGGCTCCTGCATAACCGATGATTTAAGCAGCTTCAAGCACAAGCTGAGAGAGTTGGAAAGTGTAATGCTTGGCCCTGACTCCGATAATCTTGATAGTTATGACAGTGCCATAAGCAATGGAAACAACTTTGCTTCACTTGAGATGGACAGTTGGAGACAAACAATGATGGCCATTTCAAGCAAAAACCTGAAGCACATCCTTATTGCATGTGCCAGAGCCATTGCAGACAATGATTTGCTGATGGCACAATGGCTGATGGATGAATTGAGGCAGATGGTGTCAGTTTCTGGCGATCCAATTCAAAGGTTGGGAGCATACATGCTGGAAGGACTTGTTGCACGATTGGCTGCTTCTGGGAGTTCAATATACAAAGCTTTAAGATGCAAAGAACCTGAAAGTGCTGAGCTTCTCTCCTACATGCACATACTGTATGAGGTTTGCCCCTACTTCAAATTTGGCTACATGTCTGCAAATGGAGCCATTGCAGAAGCTATGAAACATGAAGAGAGGGTGCACATAATTGATTTCCAAATTGCTCAAGGAAGCCAGTGGATCACTTTAATTCAGGCTTTTGCAGCTAGACCTGGAGGGCCACCCCACATCCGGATTACAGGTATTGATGACTCACAATCAGCTTATGCCCGTGGTGGTGGACTTCACATAGTGGGAAGGAGATTATCAAAGCTTGCTGAGCATTTTAAGGTGCCATTTGAATTTCATGCTGCAGCTATCTCTGGTTGTGATGTTCAACTACATAACCTTGGAGTTCGACCGGGGGAAGCTCTGGCTGTGAATTTTGCATTCATGCTTCATCACATGCCGGATGAAAGTGTGAGTACTCAGAATCACAGGGATAGGCTGTTGAGGTTGGTAAGGAGCCTATCCCCAAAGGTGGTGACACTTGTTGAGCAGGAATCGAACACAAACACTGCTGCATTCTTTCCACGTTTCCTTGAAACTCTGGACTACTACACAGCAATGTTTGAGTCAATAGATGTGACTCTTCCCAGAGATCGTAAAGAGAGGATCAATGTTGAGCAGCATTGTTTGGCAAGAGACTTGGTCAACATCATAGCTTGTGAAGGGGTTGAGAGGGTGGAACGGCATGAGGTGCTTGGGAAATGGAGGTCAAGATTTGCAATGGCCGGTTTCACTCCTTACCCTTTGAGTTCACTGGTGAATGGTACCATTAAGAAATTGCTTGAGAACTACAGTAATAAATATAGACTTGAAGAGAGAGATGGAGCTCTTTATCTGGGTTGGATGAATAGAGATTTGGTTGCTTCTTGCGCATGGAAATGA 1632 0.4436 MQASEQHRSSSMYYQPLQQIETYCLPQYRTINQQLYYHDGGHGTHFSTPSSSELYCTLESSSVAGSFTLYNSPSTVSFSPNSSPISQQDSQSYPTDQYHSPENTYGSPLSGSCITDDLSSFKHKLRELESVMLGPDSDNLDSYDSAISNGNNFASLEMDSWRQTMMAISSKNLKHILIACARAIADNDLLMAQWLMDELRQMVSVSGDPIQRLGAYMLEGLVARLAASGSSIYKALRCKEPESAELLSYMHILYEVCPYFKFGYMSANGAIAEAMKHEERVHIIDFQIAQGSQWITLIQAFAARPGGPPHIRITGIDDSQSAYARGGGLHIVGRRLSKLAEHFKVPFEFHAAAISGCDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVRSLSPKVVTLVEQESNTNTAAFFPRFLETLDYYTAMFESIDVTLPRDRKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSNKYRLEERDGALYLGWMNRDLVASCAWK 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01057 543 ProSiteProfiles GRAS family profile. 164 543 IPR005202 -
Spst8g01057 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 151 537 IPR005202 -
Spst8g01057 543 Pfam GRAS domain family 173 543 IPR005202 -
Spst8g01057 543 MobiDBLite consensus disorder prediction 78 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01057 Spst-Chr8 9229945 9231576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01057 12 543 GRAS Transcription Factor Family AT5G48150 66.171 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst8g01057 GRAS 1e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01057 - - gmx:100808300 1020.38