Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01055 ATGATTCTGATAGACAACGATGCTTGGGATAAAGAATGTCTTATCCTATACAGAATCAGGAAGCATAGACAGAATGGCATCAAAGTGGATCCAATAACCTTACCGAAGATTTTTCTCCTGGCCGCCCATCCTAGCACCAATGAGCATGATGAACTCAAGTCAGTTGGTATCATAGATGATATACTAATGAAGCCTCTTTGCCTTAGTTCTTTGGTTCACTCTTACAGAGAATCCGTTGGCACTGAAAATAAGCAAGTAAATAGGAAGAAAGTATCCAAACTTGGGAGTTTATTAATGCACAAACAAATTTTGGTGGTTGATGATAATGCAGTGAACAGAAGAGTTGCAAAAGGTTTTCTACAGAAATATGGGGCAAAAGTTACTTCTGTGGAGAGTGGCATGGCCGCTCTAAAGATGCTTAAACTGCCACATAATTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGATGGTTTTGAAGCAACCAGGAAAATCCGCCGCCTGGAGAGAGAGGTAAATGAGAAAATTGCCTGTGGGCAAGCATCTGCAGATATGTTTGGTAACATCTGTTATTGGCACATTCCAATACTAGCAATGACAGCAGATGCAACTCAGAGTTCAGATGAAGAGTGCAGAAATTGCGGAATGGATGACTTCGTGACGAAGCCATTTGAAGAAGAGCAGCTATATACGGCAATGGCACGTTTCTTCTAG 720 0.4111 MILIDNDAWDKECLILYRIRKHRQNGIKVDPITLPKIFLLAAHPSTNEHDELKSVGIIDDILMKPLCLSSLVHSYRESVGTENKQVNRKKVSKLGSLLMHKQILVVDDNAVNRRVAKGFLQKYGAKVTSVESGMAALKMLKLPHNFDACFMDLQMPEMDGFEATRKIRRLEREVNEKIACGQASADMFGNICYWHIPILAMTADATQSSDEECRNCGMDDFVTKPFEEEQLYTAMARFF 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01055 239 SMART REC_2 101 235 IPR001789 GO:0000160
Spst8g01055 239 CDD REC_hyHK_CKI1_RcsC-like 103 235 - -
Spst8g01055 239 SUPERFAMILY CheY-like 101 237 IPR011006 -
Spst8g01055 239 ProSiteProfiles Response regulatory domain profile. 102 239 IPR001789 GO:0000160
Spst8g01055 239 Pfam Response regulator receiver domain 103 235 IPR001789 GO:0000160
Spst8g01055 239 Gene3D - 99 239 - -
Spst8g01055 239 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01055 Spst-Chr8 9216726 9218023 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01055 1 239 Miscellaneous Gene Families AT5G35750 59.583 6.28e-89 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst8g01055 Response_reg 8.5e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01055 K14489 - gmx:100781655 399.438