Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01043 ATGTCCCAAACAAGCACGTCCTCAGCTGGTGGTGATACTGGTGCCGCCGTTGAACTTGGCGCTACCTTACTTGGTTCTACTACCGTCACCAGAGGGAAATACACTAGGATATGGCGTAAAAGTTTATACATAAGGTTCCTCATTTCTGTGAAGAAGTCAGCAAGTTCCAGTGACAACCATGAGTCTCCACCATCACCGGACTCACCACTTCCTTCAATACCATACACTTCATTTTCTCCTGCTAGAACCTCCCCTTCCGGATCCTATGTTACAATTGATGTAAGAGACGAAGAAGACTACATTAACAATAATATTGCTAGAATTGTGAAGGCCCAGGACTTGAAATCTCTACATGAGCTTGGTGGGGTTGACTCAGTTTCCACTGTCCTTGGTGGTCAACGTCAACACTCGCAGCAGGAGGGGAACACCACCATACCATTACCAGTTCCTGAAAAAAACTTGTCCAAATCTTTGTTGAACAGCTACAAATGCTACCGTTGCACAATTTTGTTGCTGTTGGTCTCAGCTGGGTTGTCATTCGCCATAGACTTCAAGCAGGAGGGACCTAAACATGGTTGGCATGATGGTGTTGCTATACTATTTGCTATTCTCCTGCTGGTTCTGGGAAATTCAATAGCAAAATTTTTGCATGAGAGCAAAATGTTGAAATTGGCGAAGAGAAAGAATGAGTTGGAATTCAGAGTTAAACGAGGTGAAGTGTCCCTAATGGTTCCCATATCTGATATTGTGGTGGGTGACACAGTGTGCCTGTGGCCAGGCGATGAGGTTCCTGCAGATGGTTTGCTTGTAAGTGATGGCATCCTTGTGCTGGCTGAGCCTGAGGAAATAAAAAGCAAACACAAGGAGAAGAATCCGTTTCTTATATCTGGTTCAAAGGTGATTGGGGGCCAGGGAAGGATGTCGGTAGCATCAGTTAGAAACAAAACCAATTTGGTTAGAAACAAAACCTGTAATTCTGAGAGGAGGGGCTTGTTGGAAAGTGTGATTGAGGAGCCGATTTCTTACGTTGACATGGCTGCTCTTTCTATCTCTGTACTGGTTGCACTTGTGGTATTAATTCGCCTAATTTATGGAAAAGATGGGAACAATGCAGGGTTGCCAGAAATGAAAGGGAAGGTCAAAATTGGCTTGTTGACGAAAGCCCTCGAGAGGCTTTTTTTGAGACCCCAAGGAAGGGTTTCCCTTTTCACAGGTCTTGTTACTGTTGCAATACTTTGCGTGCAGCATGGAATGCCACTTGTGGTTACAATTTCTCTCAAGTACCAGATTGATAAGGAAATGCCAAGCGACGATGCAGTTCTTAATGATTTGTCCGCTTGTACGACGATGGGGTTGGTAACTGTCATCTGTATTGATGTATCAGGTGAGCTCATATCTAAACCAATGAAAGTTAGCAGAATATGGATGGGAGAGAAAGATATCAGCATTGTTGAGGGACCAGAAACAGAAAAACCCGTGCTTGACATGCTTAAACTAGGGGTTGGTTTATCAGTCCTTGCACCAGAGACTTATCTTTCCCCTGTGTTCAATTCACTTGTCTCTTGGGCAGAAACAAAATGGGAAATGAACTTGAGATCTTTCACTGAAGAAAAATTTGACATTCTTAAGCACAGCAAACTGAAATCTGGCAAAGAAGGAAGCGGAGTTTTGGTGAGAAAAATTGGGGACAGTGAAGTTCTGCACTTGCACTGGTGTGGAGCTGCATCCGCAATATTGGAGAAGTGTTCACAATACTATGATAGTAAAGGGAATTGCCATGCCATGGAAAATCAGAAAATAAAATTTGGGAAGGTGATCCAAGAGATGGAGGATAGTGGCCTTAGTTCAATTGCTTTTGCTTATAGAGAAACAGATGGAGAAGAACTTGAGCAAGAAGAACTGATCTTGTCAGGTCTGATAGGCCTGGAATACACTAGTCAAGAACCCATAAAATCAGTTTTGGAAAGTCTCAGAAATGCTGCAAATGTACAGATCAAACTGGTCTCGGAGGATGACGTCGAGGAAGTGCAAGGCATTGCTTGTGAACTAGGACTAGAACAAGGAGTTGTGCTAGAAGGTAAAAAGCTTCAAGATTTGAATGAGGAAGCTCGATTAGTCGAAGTGGATCGAGCCGATGTAATGGCAAGATTTCTTCCTGAAGACAAACTTCTCATGATACAGTGCTTGCAAGAGAAAGGTAAGGTGGTTGCATTCATTGGGACAAGGATGATGAGTAGTCATACTTCAGTTCTTAAGGTAGCTGACGTGGGGATAGTTCGTGATTCTCTGAGCCCAAGAGTGGATAGAGATAGTTGTGACATATCTATCAAATGTTTCAGTGCATTGGAACCCATTGTGATGGCTGGCAGAAGTAAATACCGCAATATTCAGAAGTTCATTCAACTTCAGTTGACATCTACAATATCAGGATCAGTCATAACCTTGATTACGACATGTGCTGGAGATTCCCCCCTTGCACCATTCCAGTTGATTTGGGTGAATGTTTTGATGTGCATTCTGGGGGGCCTAATGATGGTAATGAAGTTAACCAGAGAGGAACAGCTTGCTAAACAACCATCTGATGATAGGAAACAACATATTATAGCCGGAGAAATCTGGAAAAGCATTGCTATTCAGGTATTATATCAGACTTCTGTATCAATGATACTTGAGTATGGTGGACATATTACTGACTGGGAGAAGAAAGTTAGGGAAACCATGATCTTTAACACGTTCTTATTGTGCCAGATCGTCAATCTGCTGAACACCATGCAGTTGTTGAGAAAGGATGTTGCCAAGGTGGTTGTTCAGAGCTTCTATTTCTTGGTTGCCTTAGGTTGCTGTTTTCTTATGCAAGTGGTGGTGATAGAATATGCTAAAGGCCTAGCAGATTGCTTGCAGCTGAATGCTACGAGATGGAGTATCTGTGTCATGATTGGTGCTCTTGCATGGGTATTTGAGTGGAGCATGAAGAATATTCTTTCGGTTATTTTCAATCCTAGAACCAATTCAGAATCAATTACTTCACGTTCTTTCTATCCTTCTCCATCTTTTACTTTTCTGACGCTACTTTTGTTCCCTCTAGGACTAATTTTTACTCAGATAGGCATGAACATATCTCTTCGTTAG 3129 0.4251 MSQTSTSSAGGDTGAAVELGATLLGSTTVTRGKYTRIWRKSLYIRFLISVKKSASSSDNHESPPSPDSPLPSIPYTSFSPARTSPSGSYVTIDVRDEEDYINNNIARIVKAQDLKSLHELGGVDSVSTVLGGQRQHSQQEGNTTIPLPVPEKNLSKSLLNSYKCYRCTILLLLVSAGLSFAIDFKQEGPKHGWHDGVAILFAILLLVLGNSIAKFLHESKMLKLAKRKNELEFRVKRGEVSLMVPISDIVVGDTVCLWPGDEVPADGLLVSDGILVLAEPEEIKSKHKEKNPFLISGSKVIGGQGRMSVASVRNKTNLVRNKTCNSERRGLLESVIEEPISYVDMAALSISVLVALVVLIRLIYGKDGNNAGLPEMKGKVKIGLLTKALERLFLRPQGRVSLFTGLVTVAILCVQHGMPLVVTISLKYQIDKEMPSDDAVLNDLSACTTMGLVTVICIDVSGELISKPMKVSRIWMGEKDISIVEGPETEKPVLDMLKLGVGLSVLAPETYLSPVFNSLVSWAETKWEMNLRSFTEEKFDILKHSKLKSGKEGSGVLVRKIGDSEVLHLHWCGAASAILEKCSQYYDSKGNCHAMENQKIKFGKVIQEMEDSGLSSIAFAYRETDGEELEQEELILSGLIGLEYTSQEPIKSVLESLRNAANVQIKLVSEDDVEEVQGIACELGLEQGVVLEGKKLQDLNEEARLVEVDRADVMARFLPEDKLLMIQCLQEKGKVVAFIGTRMMSSHTSVLKVADVGIVRDSLSPRVDRDSCDISIKCFSALEPIVMAGRSKYRNIQKFIQLQLTSTISGSVITLITTCAGDSPLAPFQLIWVNVLMCILGGLMMVMKLTREEQLAKQPSDDRKQHIIAGEIWKSIAIQVLYQTSVSMILEYGGHITDWEKKVRETMIFNTFLLCQIVNLLNTMQLLRKDVAKVVVQSFYFLVALGCCFLMQVVVIEYAKGLADCLQLNATRWSICVMIGALAWVFEWSMKNILSVIFNPRTNSESITSRSFYPSPSFTFLTLLLFPLGLIFTQIGMNISLR 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01043 1042 Coils Coil 696 716 - -
Spst8g01043 1042 Pfam Cation transporting ATPase, C-terminus 823 990 IPR006068 -
Spst8g01043 1042 Gene3D - 473 638 IPR023299 GO:0000166
Spst8g01043 1042 Pfam E1-E2 ATPase 234 426 - -
Spst8g01043 1042 SUPERFAMILY Calcium ATPase, transduction domain A 232 318 IPR008250 -
Spst8g01043 1042 FunFam - 779 1001 - -
Spst8g01043 1042 Gene3D - 320 472 - -
Spst8g01043 1042 PANTHER CATION TRANSPORTING ATPASE 103 994 - -
Spst8g01043 1042 Gene3D - 779 996 - -
Spst8g01043 1042 Gene3D - 211 319 - -
Spst8g01043 1042 MobiDBLite consensus disorder prediction 54 87 - -
Spst8g01043 1042 Gene3D - 639 778 IPR023214 -
Spst8g01043 1042 SUPERFAMILY Calcium ATPase, transmembrane domain M 166 998 IPR023298 -
Spst8g01043 1042 SUPERFAMILY HAD-like 455 841 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01043 Spst-Chr8 9165879 9169199 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01043 33 1002 Primary Pumps ATPases AT3G63380 32.167 2.05e-134 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01043 K01537 - gmx:102661547 1352.42