Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01037 ATGGGTCACCTCTCCCTCTCTCTTCTGTTTGATAAATGTTATATTGATTTTGAAATTGAAAGATTTAGGAAAGTAAAGTTTAATCTTGCTCGTGAAGTGAGTTTTTGTTTCTACATGGAAGCAAACAAGGAGGAAGCACTTAAAGCGATTGAGATTGCTGAAAAGCGATTTGCTGCGAGGGACTTTGCAGGTGCAAAAAACTATGCTGTAAAGGCTAAAACACTTTGTCCAGGACTGGAGGGTATATCTCAAATGGTGGCTACATTTGAAGTTTACACTGCTTCTGAGGTCAAACATAATGGTGAGCTAGATTACTATTCGATTCTTGGATTAAAACCTTTTGCAGATAAGGAGACTGTAAAGAAACAATACAAGAAGTTGGCGGTATTGCTTCACCCAGATAAGAACAAGTGTGTGGGAGCTGACGAGGCATTTAAGCTTGTTTCTGAGGCTTGGACTTGGCTATCAGATAGCGCCATGCGCAGTTCGTATGATCTCAAGAGAAATGCTCAGTTGGGCGGGACTAACCAGACGAATTTGTCTTCTGCCCATGCCACAGGGGCTGCAGGTTATAACAAATGTTCCAATTTGTCAACCCCTCGTGGTAGGCTTGACACTTTTTGGACGATCTGCACCTCTTGTAAGGTTCAGTATGAGTATCTGCGCAAGTACGTCAACAAAAGACTCTCTTGTAAGAACTGCCGTGGCACTTTTGTTGCTGTTGAGACTGGGGCAGCCCCAGCAAATGGTTCATTTCCATACTGTCCTTGGTCATATGTGGCAGGAAATGGGTATGGAAGTCATTCATTTGATGGTGTCTCATATGTTCCAACTACCGCCCCCTATTTCAATGGGAATGGTGTTGCTGGATACCATTCTGGACATGGATACGATTACGTTCCAAATGTTTCATTTCAGTGGGGCTCTGCTGGAGTTGTCAATCAAAATGGATCAGCTACCTTATCTGCGGATTCTGTCAATCGGGCCAATGGAAATGTGAAGAGGGGAAGACCAAAAATCAAATCAGTTGCTGATAAGAGGCATCACATGGTAGAGGCTATGGTCAATACAAATTCAGATATACCATTCTCCTGTAGTGAACCACAGGAAGATAAACTAGGTAGACCTGACAAGAAACAGAAAGTTGTTGTGGGAGGCACTTTCAGAAATGACTATGAAGAAAAGGGATCAAAATGTGCTCTAGAGTCTATAGTGTCTAATGGAAATGATAGCACTGCATATGGCCAGAAGCCTTCCTGCACAGTTGAAGTTCAAATCAAACAGTGTTCCATGGCACCGGCATTTGATGCGAGAAAATTATTGATTGAGAAAGCCAGGACAGAAATCAGGAAAAAACTGGAGGAGATGAAGCTGTCGACTGAAGCAGCAGCGACCGCAGCTCTGAAAGAGAAAGAAAAATCACAAGCTGAAGTTGGTCAAGTAAAAATAGAGACATGCAGAAAAACAGCCCCCAATGTTTCTGGTCTACATGGGAAAACTGGTCCAATCTCAATTACTGTCCCAGATTCTGACTTTCACGACTTTGATAAAGATAGGTCAGAGGAATGCTTCAGACCAAAGCAAATATGGGCCTTGTATGATGAGGAAGATGGAATGCCACGGTTGTATTGTATGATACGTGAGGTTGTGTCTGTCAATCCATTTAAGATTCACATCAGTTACTTGAGTTCTAAAACTGATACCGAGTTTGGCTCAGTAAACTGGCTTGACTCAGGTTTTACCAAATCTTGTGGCAATTTCAGGGCTTTTAATTCAGATGTTGTTGATCATGTTAACATATTTTCCCATGTTCTAAGTCAGGAGAAGGCTGGTCGAGGGGGTTGCGTCCGCATATATCCCAGAAGTGGAGATATTTGGGCTGTGTATCGCAATTGGTCACCAGATTGGAACAGATCTACTCCAGATGAAGTGAGGCATCAGTATGAAATGGTTGAGGTGCTGGACGATTACTCTGAGGAACTTGGTGTATGTGTTAGTCCCCTTGTTAAGTTGGCTGGATTTAAAACGGTATATCAGAGTAATAGCGACAAGAGTGCCATAAAATGGATACCCAGAAGAGAGATGTTACGCTTTTCACATCAAGTGCCTTCTTGGTTGCTGAAAGGAGAGGCTAAGAATTTGCCAGAAAGGTGTTGGGACCTGGATCCGGCTGCAACTCCAGATGAGCTTCTTCATGCTGCTACAGAACCAAACCCTTTGTAG 2223 0.4296 MGHLSLSLLFDKCYIDFEIERFRKVKFNLAREVSFCFYMEANKEEALKAIEIAEKRFAARDFAGAKNYAVKAKTLCPGLEGISQMVATFEVYTASEVKHNGELDYYSILGLKPFADKETVKKQYKKLAVLLHPDKNKCVGADEAFKLVSEAWTWLSDSAMRSSYDLKRNAQLGGTNQTNLSSAHATGAAGYNKCSNLSTPRGRLDTFWTICTSCKVQYEYLRKYVNKRLSCKNCRGTFVAVETGAAPANGSFPYCPWSYVAGNGYGSHSFDGVSYVPTTAPYFNGNGVAGYHSGHGYDYVPNVSFQWGSAGVVNQNGSATLSADSVNRANGNVKRGRPKIKSVADKRHHMVEAMVNTNSDIPFSCSEPQEDKLGRPDKKQKVVVGGTFRNDYEEKGSKCALESIVSNGNDSTAYGQKPSCTVEVQIKQCSMAPAFDARKLLIEKARTEIRKKLEEMKLSTEAAATAALKEKEKSQAEVGQVKIETCRKTAPNVSGLHGKTGPISITVPDSDFHDFDKDRSEECFRPKQIWALYDEEDGMPRLYCMIREVVSVNPFKIHISYLSSKTDTEFGSVNWLDSGFTKSCGNFRAFNSDVVDHVNIFSHVLSQEKAGRGGCVRIYPRSGDIWAVYRNWSPDWNRSTPDEVRHQYEMVEVLDDYSEELGVCVSPLVKLAGFKTVYQSNSDKSAIKWIPRREMLRFSHQVPSWLLKGEAKNLPERCWDLDPAATPDELLHAATEPNPL 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01037 740 ProSiteProfiles dnaJ domain profile. 104 168 IPR001623 -
Spst8g01037 740 Gene3D DnaJ domain 91 189 IPR036869 -
Spst8g01037 740 PANTHER BNAC03G44070D PROTEIN 39 727 - -
Spst8g01037 740 Coils Coil 442 462 - -
Spst8g01037 740 PRINTS DnaJ domain signature 106 124 IPR001623 -
Spst8g01037 740 PRINTS DnaJ domain signature 124 139 IPR001623 -
Spst8g01037 740 PRINTS DnaJ domain signature 140 160 IPR001623 -
Spst8g01037 740 Pfam DnaJ domain 104 165 IPR001623 -
Spst8g01037 740 CDD DnaJ 104 157 IPR001623 -
Spst8g01037 740 SMART dnaj_3 103 160 IPR001623 -
Spst8g01037 740 Pfam Domain of unknown function (DUF3444) 504 710 IPR024593 -
Spst8g01037 740 SUPERFAMILY Chaperone J-domain 98 169 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01037 Spst-Chr8 8971123 8973673 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01037 42 343 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.769 6.14e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01037 - - gmx:100788692 1326.23