Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01033 ATGATTGAAAAATTGTGCATGCAGGTTTGTTCCACGTGGCGGGAGGTGTCGCGGTCGGATCTGCTGTGGGAGCACCTCACTAGGCGCATCTGGCGACGCACGTACCGTCTGAGGGACACGTGGCACATGGAGTTCATCCACTGGCATCGGACGGCCAGGAACTTCGAGACAGGAAGGGTGTCGTTTTCGAACCCCCATTTTGACCTTTCAGAGACCCACCAGAACCTCATCTGCCGCTGCCTCACCATCTCCGACACCCACCTTGCGTGCGGTTTCATCGACGGCACCGTGCGCCTCTTCCACCTCGAAACCAACACCCACGTCAGCACTTACATGTCCGACCACGCCCACCTCTTCGGGCCCTTCTCCCGCTCCATCGCTGGAATCGTCCTCTCCAACTCGAACATCACCTTTGCCAGGCTGGACGGGGATATCTACGTTGACACCATCACCAGGCCTGGGCCGAGCCAAGCGCCGCGGGTCGTGATGGGCTTCGTGATGAACAACGGGGTGATGGTTGGGTTCGCGGGAACGGCACGGTGGTGGGTGGGCTTGTTCGCTGGGATAGCAGGCCGGGCCTTTCAGGTGTGGAACGCCGAGAGCAGGGAGCGCGTGTTCGTTGGGGGGTCGTTGACTGATCCGGAAACGGTTATGGGGTGGCACATGCTGACGGAGTTGGTTGACCCGGTAGGGCGCGTGCGCGTCACCGGGGGTGATTTCGTGGTGGCGTGCACGGGTGTGAGGCTGGTCTGTTTCAATGCTTGGAGCCCGGAGGCTTTGCTGCGGGAAGTGGGGTCATCGTCGGGGTTTGTGGTGAGCTCGATGGACGTGAGTGAGGAGGCGTTTGTTGTGGTGGAGCGTGGCGGGGTGGGGACGGTTTGGCGCGTGGGGACTTTCGAGAGGTTGAGCCGGTTTCGGTTGAGCCGTTCGTGGATTCGGGGTTTGTGGGGGTGCATGAACCGTGGGTACGTGATAACCTACTGTCCTTACCCTTCGTCTTCATTGAGGATTTGGAACATTGAGCGTGAGGTTGGACGGTTGCGCGTGAGACTTGGGGCGAGACTTGGTCAGGCGAATAGCATGGTGGCTAATGAGAGACACGTGGCTATCTCCTCCAATGATGTTAACTTATTGGATTTTGGTGTACAGGATCCTTAG 1158 0.5907 MIEKLCMQVCSTWREVSRSDLLWEHLTRRIWRRTYRLRDTWHMEFIHWHRTARNFETGRVSFSNPHFDLSETHQNLICRCLTISDTHLACGFIDGTVRLFHLETNTHVSTYMSDHAHLFGPFSRSIAGIVLSNSNITFARLDGDIYVDTITRPGPSQAPRVVMGFVMNNGVMVGFAGTARWWVGLFAGIAGRAFQVWNAESRERVFVGGSLTDPETVMGWHMLTELVDPVGRVRVTGGDFVVACTGVRLVCFNAWSPEALLREVGSSSGFVVSSMDVSEEAFVVVERGGVGTVWRVGTFERLSRFRLSRSWIRGLWGCMNRGYVITYCPYPSSSLRIWNIEREVGRLRVRLGARLGQANSMVANERHVAISSNDVNLLDFGVQDP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01033 385 Gene3D - 46 383 IPR015943 GO:0005515
Spst8g01033 385 SUPERFAMILY F-box domain 6 78 IPR036047 GO:0005515
Spst8g01033 385 SUPERFAMILY WD40 repeat-like 72 374 IPR036322 GO:0005515
Spst8g01033 385 PANTHER WD40 REPEAT PROTEIN 12, 37 10 342 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Spst8g01033 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01033 - - gmx:100807240 537.724