Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01012 ATGACCGATATACCCTTCTCTTTCTCCACCTTTGACCGTCGTATAAAACTATCTCAATTCTCTTCGTCGCACTGCATACAAAGCCAAATTAGTCCACTTACAAGCACAACACTCTCATTCCCGTTATACCCCTCCTTGCAAAATATCCCAATGTCATTAACCCTAAATCTCACGCCCCTTACCGCTGTCACCACCACTCTCCGATCTCCACCCAGGGTCGCCATGATCCGGGCATTCACGGCCACGATAGATTCCCGCCGCCCGGCGAGCCTCTATGAAGTTCTCCGTATCAAGCAGAACGCGTCGGCGGTCGAGATAAAATCTGCTTACCGGAACCTGGCGAAGGTTTACCACCCTGATTCGGCGCTCCGGCGATCGGAATCGGACCAACGGGACTTCATCGAGATCCACGATGCGTACGAGACGCTGTCGGATCCGTCTGCGAGAGCTGTGTACGATCTGTCGTTGATGTCAGCGCGTGGCGGTGGTGGCTCATTCTCATCTTTGGTGGCTCCGAATAGCTCCTCCGGGTTGTACCACCAAACCCGCAAGTGGGAAACGGATCAGTGCTGGTAG 576 0.5382 MTDIPFSFSTFDRRIKLSQFSSSHCIQSQISPLTSTTLSFPLYPSLQNIPMSLTLNLTPLTAVTTTLRSPPRVAMIRAFTATIDSRRPASLYEVLRIKQNASAVEIKSAYRNLAKVYHPDSALRRSESDQRDFIEIHDAYETLSDPSARAVYDLSLMSARGGGGSFSSLVAPNSSSGLYHQTRKWETDQCW 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01012 191 SMART dnaj_3 89 148 IPR001623 -
Spst8g01012 191 Gene3D DnaJ domain 80 163 IPR036869 -
Spst8g01012 191 SUPERFAMILY Chaperone J-domain 90 169 IPR036869 -
Spst8g01012 191 ProSitePatterns Nt-dnaJ domain signature. 133 152 IPR018253 -
Spst8g01012 191 PRINTS DnaJ domain signature 92 110 IPR001623 -
Spst8g01012 191 PRINTS DnaJ domain signature 128 148 IPR001623 -
Spst8g01012 191 PRINTS DnaJ domain signature 110 125 IPR001623 -
Spst8g01012 191 CDD DnaJ 92 145 IPR001623 -
Spst8g01012 191 Pfam DnaJ domain 91 153 IPR001623 -
Spst8g01012 191 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 60 191 - -
Spst8g01012 191 ProSiteProfiles dnaJ domain profile. 90 156 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01012 Spst-Chr8 8787743 8788318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01012 92 153 C2H2 Transcription Factor Family AT1G74250 46.970 9.10e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01012 - - gmx:100786034 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01012 8 8787743 8788318 Spst8g01012 8 8787743 8788318 ECH
Spst6g00016 6 460162 460620 Spst8g01012 8 8787743 8788318 PCT