Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01009 ATGCTAGCCTCCGTTGAAGAACTTGGCATACCAAAACAACCAAGGAATCAACACTCTTTGCGATCAGAGTCATCAAATTCCCTTGCCAGCACTAGAGCAATTCTTGGGCAACCTCGAATTCAAAGGACCAAACCAATTATATGGTGTGCTGCAATACTGTGCTTAATATTCAGCCTAGTACTTATCTTCTTTGGGATTGCAACACTGATTCTCTACCTGGCCATGAAACCACGAAATCCCACGTTTGACATTCCCAATGCAAGCCTAAATGTAGTGTACTTTGACTCACCACAGTACCTCAATGGTGAGTTCACTCTCCTTGCAAATTTTTCCAATCCTAACAGGAGAATTGGGGTGAGGTTTGAGTCCTTGAACATTGAGCTTTTCTACTCAGACAGACTCGTATCATCACAAACAGTCAAGCCTTTTACTCAAAGGCCAAGGGAAACCAGGTTGCAGTCAGTGAACTTGATATCCAGCTTAGTGTTTTTGCCTCAAGATGTTGGTGTAAAACTTCAAAGGCAAGTGGAAAATAACAGGATCAATTACAATGCAAGGGGAACATTTAAGGTGAGGTTCAATATTGGCCTTATCCATTTATCTTATTGGCTGCATACCATATGCCAGATAGAGATGACTAGTCCTCCAACTGGTATTCTAGTGGCCAGACAATGCATAACAAACCGATGA 690 0.4203 MLASVEELGIPKQPRNQHSLRSESSNSLASTRAILGQPRIQRTKPIIWCAAILCLIFSLVLIFFGIATLILYLAMKPRNPTFDIPNASLNVVYFDSPQYLNGEFTLLANFSNPNRRIGVRFESLNIELFYSDRLVSSQTVKPFTQRPRETRLQSVNLISSLVFLPQDVGVKLQRQVENNRINYNARGTFKVRFNIGLIHLSYWLHTICQIEMTSPPTGILVARQCITNR 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01009 229 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 20 220 - -
Spst8g01009 229 Pfam Late embryogenesis abundant protein 111 201 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01009 Spst-Chr8 8760933 8761622 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01009 - - pvu:PHAVU_008G282100g 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01009 8 8760933 8761622 Spst8g01009 8 8760933 8761622 ECH
Spst6g00006 6 350999 351760 Spst8g01009 8 8760933 8761622 PCT