Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst8g01007 | ATGGGGACTAAGTCAGCTGTGGATTTAATGGAGTCTTCATCTGAGGTTCACTTTTCTGGAATTTACATGGATGGCTTAGAGCAAAGAAACGCTCGCACGGAGCAACCAACTACTTCCGCCACCGACATGAATAAACAACCTTTTGTGATAGGTGTTGCTGGTGGAGCAGCATCCGGTAAGACATCGGTTTGTGATAGGATTATTCAGCAGCTTCATGACCAACGAGTTGTACTTGTTAATCAGGATTCTTTTTACCATAATTTGACTGAGGAGGAACTTACAAGAGTACAAGATTACAACTTTGACCATCCTGAAGCTTTTAATACTGAGCAATTGCTCCGTGTAATGGACAAGTTGAAGCGTGGCCAAGCAGTAGATATTCCAAAGTATGACTTTAAGGGCTACAAAAGTGATGTTTTTCCGGCAAGACGGGTAAACATGGCGGATGTTATTATTTTGGAAGGTATCCTTGTTTTCCATGATCCACGAGTGCGGGCAATGATGAATATGAAGATATTTGTCGACACAGATGCTGATGTTCGTTTGGCTAGAAGAATTAAGCGTGATATTGCTGAAAATGCTCGTGATGTTGGAGCGGTGCTCGATCAGTATTCTAAATTTGTGAAGCCGGCTTTTGATGACTTTATTCTTCCCACCAAGAAGTATGCTGATATCATTATTCCCCGTGGAGGAGATAATCATGTAGCTATTGATTTGATAGTACAACATATTCGCACGAAGCTTGGTCAGCATGACTTGTGTAAAATATACCCTAGCTTATATGTCATTCAGTCTACTTTTCAGATACGGGGCATGCATACCCTGATTCGTGATTCTCAAACGACGAAACATGACTTTGTATTTTATTCGGACCGTTTGATTCGTTTGGTTGTAGAACATGGCCTAGGACACCTTCCATTTACAGAAAAGCAAGTAATCACTCCAACTGGATCGGTTTACAGTGGCGTGGACTTCTGTAAGAGGTTGTGTGGTGTTTCCATCATCCGGAGTGGCGAGAGCATGGAAAATGCTTTACGAGCATGCTGCAAAGGCATCAAGATTGGGAAAATTCTTATTCACAGAGAAGGTGACAATGGTCAACAGCTAATATACGAGAAGTTGCCTAATGATATCTCAAATAGACATGTATTGCTGTTGGATCCTGTCTTAGGCACAGGTAATTCGGCTGCTCAAGCAATTTCTTTACTTTTAAAGAAGGGTGTACCAGAGTCCAACATTATATTTCTCAATCTCATATCAGTAAGCACCTCAAGGTGTTCATATGGTCTGCAAAAGTTTCCCCAGAATAAAGATAGTGACATCTGA | 1326 | 0.4133 | MGTKSAVDLMESSSEVHFSGIYMDGLEQRNARTEQPTTSATDMNKQPFVIGVAGGAASGKTSVCDRIIQQLHDQRVVLVNQDSFYHNLTEEELTRVQDYNFDHPEAFNTEQLLRVMDKLKRGQAVDIPKYDFKGYKSDVFPARRVNMADVIILEGILVFHDPRVRAMMNMKIFVDTDADVRLARRIKRDIAENARDVGAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPSLYVIQSTFQIRGMHTLIRDSQTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYSGVDFCKRLCGVSIIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISNRHVLLLDPVLGTGNSAAQAISLLLKKGVPESNIIFLNLISVSTSRCSYGLQKFPQNKDSDI | 441 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst8g01007 | 441 | FunFam | Uridine kinase | 44 | 250 | - | - | |
Spst8g01007 | 441 | SUPERFAMILY | PRTase-like | 250 | 421 | IPR029057 | - | |
Spst8g01007 | 441 | Gene3D | - | 43 | 250 | IPR027417 | - | |
Spst8g01007 | 441 | PANTHER | URIDINE KINASE | 38 | 376 | - | - | |
Spst8g01007 | 441 | CDD | UMPK | 49 | 247 | IPR000764 | - | |
Spst8g01007 | 441 | CDD | PRTases_typeI | 324 | 425 | IPR000836 | - | |
Spst8g01007 | 441 | Gene3D | - | 251 | 436 | IPR029057 | - | |
Spst8g01007 | 441 | NCBIfam | uridine kinase | 45 | 247 | IPR000764 | - | |
Spst8g01007 | 441 | Pfam | Uracil phosphoribosyltransferase | 265 | 422 | - | - | |
Spst8g01007 | 441 | FunFam | Probable uracil phosphoribosyltransferase | 250 | 437 | - | - | |
Spst8g01007 | 441 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 35 | 240 | IPR027417 | - | |
Spst8g01007 | 441 | PRINTS | Uridine kinase signature | 215 | 228 | - | - | |
Spst8g01007 | 441 | PRINTS | Uridine kinase signature | 77 | 88 | - | - | |
Spst8g01007 | 441 | PRINTS | Uridine kinase signature | 193 | 204 | - | - | |
Spst8g01007 | 441 | PRINTS | Uridine kinase signature | 179 | 189 | - | - | |
Spst8g01007 | 441 | PRINTS | Uridine kinase signature | 47 | 64 | - | - | |
Spst8g01007 | 441 | PRINTS | Uridine kinase signature | 122 | 137 | - | - | |
Spst8g01007 | 441 | Pfam | Phosphoribulokinase / Uridine kinase family | 49 | 235 | IPR006083 | GO:0005524|GO:0016301 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst8g01007 | Spst-Chr8 | 8748902 | 8755687 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst8g01007 | 1 | 437 | PRT Gene Family | AT4G26510 | 79.819 | 0.0 | 721 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst8g01007 | K00876 | - | gmx:100798205 | 790.03 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst8g01007 | 8 | 8748902 | 8755687 | Spst8g01007 | 8 | 8748902 | 8755687 | ECH | |
Spst6g00005 | 6 | 329943 | 340957 | Spst8g01007 | 8 | 8748902 | 8755687 | PCT |