Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01006 ATGCCACAGGAAACCTTACCCAACTCAATTTTCGCATCTCCTCATAAGAGAGGATTGACTTTCAAAGGTTCAGCTTCAGCTTGTAACAACAATGAGGCTTCTTCATACACTGTGATGTCGGAGGAGAGCATCAACGATCATGAATTGGCTCAGAGGAAAGCAGAGGAAGCAGCTTCAAGGAGATACGAAGCAGCAGAATGGCTTCGCCAAATGGACAATGGCGCATCTTCATCGCTCTCCAAAGAACCTTCCGAAGAAGAATTCTGCCTCGCACTTCGCAACGGCCTCATTCTCTGCAACGTCCTCAACAGAGTCAACCCCGGCGCTGTCGTCAAGGTTGTCGACAATGCGGTGGTCGACAACCTCGCCCTTCAGTCTGCCGAGGGACCCGCACAGTCCGCAATTCAGTATTTCGAGAACATGCGAAACTTTCTTGAGGCCGTCAACGACATGAAGCTTTTGACATTCGAAGCTTCCGATTTGGAAAAGGGGGGTTCGTCGAGCAAAGTTGTGGACTGCATTCTCTGTTTGAAAGGGTATTATGAGTGGAAGTTGTCGGGTGGAGTAGGGGTGTGGAGATATGGTGGAACTGTTAGGATTACTTCCTTCCCCAAATGGTCTCCTTCTAACATACTCGGCATTGAAAGTGTTGATGAGTCTGAGTCATCACAGTTTCTTCATCTGTCTGGAGAGGTATCAGTTGAAGAAACAAAAGCTGCTAATGCTTTGACTTCCCTTTTTGATCAGTTTGGACTCAAGCTTCTCCTGGCTTACCTAAGAGAGGCTGATGGGGTTGATGATCTGCCGTTGAATGCAATGGTAATAGATTCTTTGCTCGGGAAGATTATCAGGGATTTTTCTGCATTGCTTGATTCTCAAGGCACTCAGCTTGGACATTTCCTGAAAAAGATATTGAAAGGCGATACTGGTGGCCTCTCTAAGAGAGATTTCGTAGAAGCTATCACATTATATCTTAATCAAAGACGTAGTTTGGCATCAAATGATATCTCAAAACTATGCACTTGTGGTGGGAAACGAGACAGTAATCAGCAGAGTGTCAAATATTGTGCCAAACATGCTGAAATAATTGATGCCCAGCAAAAAGAGCTTGAGGGACTGAAGTACTCCTATGAAGAGATAAAATTGGACCTCAAACAAATTCAATCAAAGTGGGACCAACAATTGAGCACGTTCGAGAGTCATATAAAGAGCCTTGAAGAGGCCTCCTCTTCCTATCACAAAGTTTTGGAGGAGAATCGTTTTCTTTACAATCAAGTACAAGACCTCAAAGGAGCCATTAGGGTCTACTGTAGAGTGAGGCCCTTCTTACCAGGACAACCAAATGGTCAATCTACTGTAGATTATATAGGAGAAAATGGAAACATAATGATTATGAATCCCCTTAAGCAAGGAAAAGATGCCAGGAGGGTGTTTTCATTCAATAAGGTGTTTGCAACAAGTGCCACCCAAGAACAAATATACGCTGATACTCAACCATTGGTTAGGTCCGCCTTAGATGGATATAATGTATGCATCTTTGCATATGGACAGACTGGGTCAGGAAAGACCTACACAATGAGTGGGCCTGATCTGATGACTGAAGAGACTTGGGGTGTAAACTACAGGGCTTTGCGCGACTTATTTCATATTTCAAAGGAAAGAGCAGATGCCATAAAATATGAAGTTGGCGTCCAGATGATTGAAATATACAATGAACAAGTGAGAGATTTATTAGTCAGCGATGGCTCTAACAGAAGATATCCTTCAAGCCGTACTTGCTATATACGAAACAACTCTCAATTAAATGGGCTTAATGTGCCTGATGCATCTTTAGTTCCGGTTAATTGCACACAAGATGTTCTTGATTTAATGAAAATTGGTCAGAGGAATCGTGCTGTTGGTGCTACAGCTCTAAATGAGCGAAGCAGCCGTTCTCATAGTGTGTTGACAGTTCATGTCAGAGGGAGGGACTTAGTATCTAACTCCATTCTTAAGGGTTGTCTTCATCTTGTGGATTTGGCTGGAAGTGAGAGAGTGGACAAATCCGAGGCTGTTGGCGAGAGACTAAAGGAGGCTCAGCATATAAATAAATCTCTTTCTGCACTTGGGGATGTTATCTCTGCTTTGGCACAGAAGAGTCAACATATTCCTTATAGAAATAGCAAGCTCACACAAGTTCTACAAGATTCATTAGGTGGTCATGCAAAAACTTTGATGTTTGTTCATATAAATCCTGAGCTTAATGCTCTTGGAGAGACAATTAGCACACTTAAGTTTGCAGAGAGGGTTGCGACCATTGAGCTTGGGGCTGCTCAATCTAATAAAGAAACTGGAGAAATTCGGGAGCTAAAGGATGAGATATCAAATATCAAATCAGCATTGGAGAAGAAAGAAACTGAACTACAGCAGTGGAAAGCTGGGAATGCACGAAATCCTATGGAATCTCAGAAAGCACCAAGAGCTGTTTCACCTTTCCGTTTGCCCAAAAATGGTACCAGTGACAGCATGAAGCCTGAAAACTATCTAAGACACATGGATGATAGAAGCTCCGAGGCTAAAACTTGTTCTTCGGGTAAGCTAAGAAGGTCAAGATTTCCCTCAACAAATATAGAAAAGGAGTCCATACCAAAAATGTCTATTTTGGCTGAAGAAAAAATAGTGAGCTCAGGGAAAGGTAGATCACCATCACCTCCAGTCAAGAGGAGATCAATATCAACTGATAGAGGGTCAGTTATTAAAAGCAAGGTCCGAAGTGACACAGTAGAAAATCAACAAATATCAAAGCATCTACTTTCAGCTAGAGTACTAGTAAATAAATCTCTTGTCTCAATGCCAATGCCCTCGTCTATAGACAATAACTCAAGGGTGAATCTGCATTCACAGGAGTCACTGAAGCAAGATAGTACTAATGAAACTCTCTTCAACCTCCAGAAGGTAAACTCCAGGAAAGTTAATGACGAACATGAAGAGGAACAACTCAAGCAAGCTGCTCTTGGTGTGGTAAGACAAGGTGGAACTAGGAAAAACAGGCCTGACAGTAAGGCCAAGGTTAAGCCTCATCAACAAATGCCCTTCAGGATTCAAAAGCCTGATATGATACCTATTTCTGACACGGACATTGGCCGTGAAATGACCATGGAGGCACCTCGAAAGAGCAATTACCGTGAGCCAGAAAATGATATAAGCCTCATGGAGTCTGCAGTCCTTGGTGCTAATCTTAAAAAAATACATCAGAACATCTCTAGGAATTTTCAGAACATTGGATCAAGAGGAATAGAGCAAGCAGCTGAACCATTATTGTCGAGCAAAGTTGAAAATAAAATATTACAACAAGGTTCAGGACGCAATCTTAAGGAAGGCACCAATAGTACATTGCCTGAATTTAGAAGGAGCCGATCTACGCCACGTGGAAAGTTATTTGTTTTATCTTGA 3432 0.4242 MPQETLPNSIFASPHKRGLTFKGSASACNNNEASSYTVMSEESINDHELAQRKAEEAASRRYEAAEWLRQMDNGASSSLSKEPSEEEFCLALRNGLILCNVLNRVNPGAVVKVVDNAVVDNLALQSAEGPAQSAIQYFENMRNFLEAVNDMKLLTFEASDLEKGGSSSKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSFPKWSPSNILGIESVDESESSQFLHLSGEVSVEETKAANALTSLFDQFGLKLLLAYLREADGVDDLPLNAMVIDSLLGKIIRDFSALLDSQGTQLGHFLKKILKGDTGGLSKRDFVEAITLYLNQRRSLASNDISKLCTCGGKRDSNQQSVKYCAKHAEIIDAQQKELEGLKYSYEEIKLDLKQIQSKWDQQLSTFESHIKSLEEASSSYHKVLEENRFLYNQVQDLKGAIRVYCRVRPFLPGQPNGQSTVDYIGENGNIMIMNPLKQGKDARRVFSFNKVFATSATQEQIYADTQPLVRSALDGYNVCIFAYGQTGSGKTYTMSGPDLMTEETWGVNYRALRDLFHISKERADAIKYEVGVQMIEIYNEQVRDLLVSDGSNRRYPSSRTCYIRNNSQLNGLNVPDASLVPVNCTQDVLDLMKIGQRNRAVGATALNERSSRSHSVLTVHVRGRDLVSNSILKGCLHLVDLAGSERVDKSEAVGERLKEAQHINKSLSALGDVISALAQKSQHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNALGETISTLKFAERVATIELGAAQSNKETGEIRELKDEISNIKSALEKKETELQQWKAGNARNPMESQKAPRAVSPFRLPKNGTSDSMKPENYLRHMDDRSSEAKTCSSGKLRRSRFPSTNIEKESIPKMSILAEEKIVSSGKGRSPSPPVKRRSISTDRGSVIKSKVRSDTVENQQISKHLLSARVLVNKSLVSMPMPSSIDNNSRVNLHSQESLKQDSTNETLFNLQKVNSRKVNDEHEEEQLKQAALGVVRQGGTRKNRPDSKAKVKPHQQMPFRIQKPDMIPISDTDIGREMTMEAPRKSNYREPENDISLMESAVLGANLKKIHQNISRNFQNIGSRGIEQAAEPLLSSKVENKILQQGSGRNLKEGTNSTLPEFRRSRSTPRGKLFVLS 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01006 1143 MobiDBLite consensus disorder prediction 1110 1143 - -
Spst8g01006 1143 Gene3D Kinesin motor domain 375 768 IPR036961 -
Spst8g01006 1143 SMART kinesin_4 430 774 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst8g01006 1143 Coils Coil 363 383 - -
Spst8g01006 1143 MobiDBLite consensus disorder prediction 1002 1021 - -
Spst8g01006 1143 MobiDBLite consensus disorder prediction 1110 1130 - -
Spst8g01006 1143 SMART ch_5 60 180 IPR001715 GO:0005515
Spst8g01006 1143 Pfam Calponin homology (CH) domain 59 182 IPR001715 GO:0005515
Spst8g01006 1143 Gene3D - 50 182 IPR036872 -
Spst8g01006 1143 PANTHER KINESIN-LIKE PROTEIN KLP-3 65 961 IPR027640 GO:0003777|GO:0007018
Spst8g01006 1143 ProSiteProfiles Kinesin motor domain profile. 432 766 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst8g01006 1143 MobiDBLite consensus disorder prediction 886 910 - -
Spst8g01006 1143 SUPERFAMILY Calponin-homology domain, CH-domain 52 210 IPR036872 -
Spst8g01006 1143 CDD KISc_C_terminal 430 768 - -
Spst8g01006 1143 PRINTS Kinesin heavy chain signature 667 685 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst8g01006 1143 PRINTS Kinesin heavy chain signature 507 528 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst8g01006 1143 PRINTS Kinesin heavy chain signature 636 653 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst8g01006 1143 PRINTS Kinesin heavy chain signature 716 737 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst8g01006 1143 CDD CH_AtKIN14-like 60 178 - -
Spst8g01006 1143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 433 803 IPR027417 -
Spst8g01006 1143 Pfam Kinesin motor domain 438 766 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst8g01006 1143 MobiDBLite consensus disorder prediction 839 858 - -
Spst8g01006 1143 FunFam kinesin-like protein KIN-14F 427 807 - -
Spst8g01006 1143 ProSiteProfiles Calponin homology (CH) domain profile. 58 182 IPR001715 GO:0005515
Spst8g01006 1143 MobiDBLite consensus disorder prediction 801 872 - -
Spst8g01006 1143 FunFam kinesin-like protein KIN-14F 50 182 - -
Spst8g01006 1143 Coils Coil 773 807 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01006 Spst-Chr8 8732878 8741601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01006 368 766 Calmodulin-binding Proteins AT5G65930 40.852 8.48e-76 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01006 K10406 - gmx:100811516 1919.44