Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00999 ATGGACCAAGAAATTGCCATGAAAAGTATGTGGCCCACCAACCTAAGTTCTGCCTCCATATATGATATACAGGCAAGCTCTTTGTCTGATGCAGTTGACTCACGGTATCTACACTATATTATTAGAATACTTGACTTCAACAAGTTCGCATTAGCTTCCAAGATCATGGAGAATGAAAGAGAAGATGAGATTGAGAACATGTCAATGTCACCCCCATCTCTGGGCTCCATCCAAATTGCAGGGAGCAATGGCTTTGGTCACAGCATGGAGTTCATGTCTCAGGCATACCTTCCGAATATGTACACAGAGATTGACATAAAAGTTGAGGATTCCAATTTCAACCAAGATCCCCCCCTCCCCATTTATCTCAAGTTTGAAGATGTAGAGTATAAGGTGAGAGATAGCCAAGCGGCTTCCATTAATCCTGTTAAGTCGGTGATGTCAAAAGTAGCCACACAACACAGCGTGGAAGAAGATAGATACAAGAAAATTTTGAAGGGTATGACGGGAAGCATTGGCCCTGGTGAAATTCTTGCTTTGATGGGTCCTTCTGGTAGTGGGAAGACAACCTTGTTGAGAGTTATAGGGGGAAGATTAGTTGACAATGTAAAGGGAAAGATAACTTACAATGACGTTCGATTTAATCCAGCTGTCAAGAGGAGGATTGGATTTGTTACACAAGAAGATGTGCTTTTCCCACAACTTACAGTAGAGGAAACATTAATTTTCTCTGCATTCTTGAGGTTGCCAGGCAATTTGAGCAAGCAACAAAAGTATGCAAAAGTGGAGACCACTGTCAAGGAGCTAGGCCTTGAAAGATGTCGCCACACAAAAATAGGTGGAGGATATCTCAAAAGCATCTCTGGAGGAGAAAGGAAGCGAACCAGCATAGGCTATGAAATCCTTGTTGATCCTTCACTGCTTCTACTTGATGAACCAACTTCTGGCCTTGATTCCACCTCAGCAAACAGACTCCTTCTCACTCTTCAGGGACTTGCCAAGGGAGGAAGGACCATAATCACAACAATTCACCAGCCCTCCAGCAGAATTTTTCACATGTTTGACAAACTTCTTGTTATATCAGAAGGCTATCCCGTTTACTATGGGAAGGCCAGGGACTCAATGCAGTACTTTTCATCGTTGAGGTTCACAACGGAAATACCAATGAATCCTGCAGAATTCTTGCTTGACTTGGCAACTGGACAAGTAAATAATATAAGTTTTCCACAAGAAATTTTCATAGATCAAGAAGCTGCTGACTGTTCAAAATCTGTTATTCAATATCTACAACTCAAGTACAAAGAAACACTGGAACCAAAAGAAAAAGAAGAGAATCATGGAGCAGCAAACACACCAGAACATCTTCAGCTAGCTATTCAGGTTAAAAAGGACTGGACAGTGAGTTGGTTGGACCAATTCGTTATTCTTTACAAGAGGACATTCAGAGCAAGATGCAAGGACTATTTTGATAAATTAAGGTTAGTTCAAGCACTTGGCATTGCTCTTTTGTTGGGGCTACTTTGGTGGAAATCATCAACCAATACAGAGGCTGAAGTTAGGGATCAGGTTGGTTTAATGTTCTACATCTGTATATTCTGGACATCTTCATGTATTTTTGGAGCGGTCTATGTCTTTCCATTTGAAAAGGTCTACTTGGTGAAAGAAAGGAAAGCAGAAATGTATAGACTGAGTGTTTACTACGTGAGCAGCACTCTCTGTGATATGGTGGCGCATGTTTTTTACCCTACTTTTTTCATGCTTATCTTGTACTTCATGGCTGGATTTAAGAGCACTGTTGCTTGCTTCTTCCTGACTTTGTTGGCGGTGTTGTTAATAGCTATAACAAGTCAAGGAGCAGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCAGGGATGGTTGCTTCTTTGATACTAATGTTGTTCCTTCTCACTGGTGGCTATTATGTCCAGCACGTACCGAAGGCGATGCAGTGGTTGAAGTATTTGTCGTTCGTGTACTACGGATTCAGACTTCTTCTAAAAGTGCAGTATTCAGGAGCGCAACTATACGAGTGTGAAAGCGAAAAAGGGTGCAGGACACTGCAGAGTTCACCATCATTTGACACAGTAAACTTGAAAGGAGGCTTAACTGAAGCATGGATTCTGGTAGCCATGGCTCTTTGCTTCCGTATCTTTGCATACTTCTGTCTCCGCAGACGAATTGACGCCTATTAG 2223 0.4188 MDQEIAMKSMWPTNLSSASIYDIQASSLSDAVDSRYLHYIIRILDFNKFALASKIMENEREDEIENMSMSPPSLGSIQIAGSNGFGHSMEFMSQAYLPNMYTEIDIKVEDSNFNQDPPLPIYLKFEDVEYKVRDSQAASINPVKSVMSKVATQHSVEEDRYKKILKGMTGSIGPGEILALMGPSGSGKTTLLRVIGGRLVDNVKGKITYNDVRFNPAVKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPGNLSKQQKYAKVETTVKELGLERCRHTKIGGGYLKSISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANRLLLTLQGLAKGGRTIITTIHQPSSRIFHMFDKLLVISEGYPVYYGKARDSMQYFSSLRFTTEIPMNPAEFLLDLATGQVNNISFPQEIFIDQEAADCSKSVIQYLQLKYKETLEPKEKEENHGAANTPEHLQLAIQVKKDWTVSWLDQFVILYKRTFRARCKDYFDKLRLVQALGIALLLGLLWWKSSTNTEAEVRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLVKERKAEMYRLSVYYVSSTLCDMVAHVFYPTFFMLILYFMAGFKSTVACFFLTLLAVLLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHVPKAMQWLKYLSFVYYGFRLLLKVQYSGAQLYECESEKGCRTLQSSPSFDTVNLKGGLTEAWILVAMALCFRIFAYFCLRRRIDAY 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00999 740 CDD ABCG_EPDR 120 369 - -
Spst8g00999 740 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 107 727 - -
Spst8g00999 740 Pfam ABC transporter 165 315 IPR003439 GO:0005524
Spst8g00999 740 SMART AAA_5 174 365 IPR003593 GO:0016887
Spst8g00999 740 Gene3D - 150 383 IPR027417 -
Spst8g00999 740 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 150 387 IPR003439 GO:0005524
Spst8g00999 740 Pfam ABC-2 type transporter 472 680 IPR013525 GO:0016020|GO:0140359
Spst8g00999 740 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 380 IPR027417 -
Spst8g00999 740 FunFam ABC transporter G family member 22 152 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00999 Spst-Chr8 8686500 8689956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00999 163 363 Calmodulin-binding Proteins AT2G36910 28.293 1.43e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00999 K05681 - gmx:100815259 1230.7