Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00984 ATGGGCACGTGCATGTTCATGGTTGTCTTCTTCATCTTCACGCTGTTGGGGGCGTTGTGTGATGAGGTGCTAGCCACAGAAAACAACATCAGCTTCGACTTCCCTTCTTTCACTCACAACAATAACATTACTCTTCTCGGTGATTCCTTTCTAAGGAGCAACGGCGTCGTAAGACTCACCAACGCCGTCCCCTCTTCCAGCACTGGCGCAGTCATCTACTCCCACCCCATCGCCCTCTTCCACCCTCATACCGCCTCCTTCGCCTCCTTCTCCACCGCCTTCTCCTTCTCCATCAACAACCTCAACCCTACCTCCTCCGGCGACGGCCTCGCCTTCTTCCTCGCCCCCAATACCACCGCCAATCTCTCCCTCTCCGCCCCCCTAAGCCTCCCCCCATCCTTTGTCGCCGTTGAGTTCGACACGCGTCTCGACTCCGGCTTCGATGATCCCAACGAGAACCACGTCGGCTTCGACGTCGACGCCTTGAAGTCCTTCAAAACTGTTGACCCCATCTTGCACGGCATCGACCTCAAGAGCGGCAACACCATCATCTCATGGATCGACTACAACACGGATCGAACTTTGCTCACCGTTTTCTTGAGCTATTCACGTCCAAAACCCGTCGACCCAGTTCTCTCCGTCAAGTTCGATCTTTCTGAGCACTTGAGAAACCCCGTCTACGTTGGATTCGCCGCTTCCACTCGAGGACATACAGAGATTCACCAAATCCTGAGTTGGACTTTTCACAGTGCTTTTTCTCCCGCAAGAAAGAGGTTGCACCCTCACAACGTTTCCGTGGTGGGAACTGTACCTATTTCTGGTTTAGGTTCTAGTTCCGGTTCCCGTTCTATTTCTACTTCCAAGAAGCTTGACAAGAGGGTTGGCATTGGTGTGGTTGTTGCGGGTTCTGTCTCTTTCTTTGTGGGTTTTTCAATCTTGGGGTATGTCTTTGTTCGGAGATGGAGAGGTGGGAGAAAAGAGAAGTTTCAGAATGGTTTAGTGGCGTGTCCTAGAGCGTTCAATTACAAAGAGTTGAAGTCTGCGACAAGAGAGTTTCATCCGACTAGGATTGTTGGGCATGGATCATTTGGGACGGTGTATAAGGCTTTCTTTGTATCTTCTGGAACCATTGCTGCAGTGAAAAGGTTGCGGCACTCTCACGAAGGAAAGACTGAGTTTCTGGCTGAACTCTCCATCATAGCTGGTTTGCGGCACAAGAATTTGGTTCAGCTGCAAGGTTGGTGTGTTGAAAAGGGGGAATTGTTGCTGGTGTATGACTTTATGCCCAATGGAAGCTTAGACAAGATGCTTTACAAGGATCCTGAAAGTGGGAGGTTGTTGTGTTGGTCTCAGAGGGTCAACATTGCTCTTGGGTTGGCCTCTGTGCTGGTTTACCTTCACCAAGAATGTGAGCAGAGAGTGATTCATAGAGACATTAAGGCTGGCAACGTATTGCTGGATGGAAACTTCAACCCTAGGTTGGGGGATTTTGGATTGGCAAAGCTCATGGATCATGATAAGAGTCCTGTGTCCACTTTAACTGCTGGAACAATGGGGTACCTTGCACCTGAGTATCTTCAGTACGGAAAGGCCACTGATAAGTCTGATGCTTTCAGCTATGGGGTGGTTGTGCTTGAAGTGGCTTGTGGGAGGAGGCCAATTGAGAGAGAAGGGTCCAAGATGGTGAATCTGATTGAGTGGGTTTGGGGGCTACACTCAGAGGGGAAGGTGATTGAAGCTGCTGATAAGAGGTTGAATGGGGAATTTGAGGAAGAGGAAATGAGGAAGCTCTTGCTCTTGGGATTGAGTTGTGTTAACCCTGACAGTGCTGAGAGGCCATCCATGAGGAGGGTGCTCCAGATTCTTAGCAATGAGGCTGCACCACTTATTGTGCCAAAAGTGAAGCCAACACTCACCTTCTCTTTTGACCTGCCTCTCACTATTAAGGACATTGTTTCTGATGATGAAGAGTTGAGTACCAGCCCGTCTTTGTGTGAGATCAAAATTGACTGA 2013 0.4963 MGTCMFMVVFFIFTLLGALCDEVLATENNISFDFPSFTHNNNITLLGDSFLRSNGVVRLTNAVPSSSTGAVIYSHPIALFHPHTASFASFSTAFSFSINNLNPTSSGDGLAFFLAPNTTANLSLSAPLSLPPSFVAVEFDTRLDSGFDDPNENHVGFDVDALKSFKTVDPILHGIDLKSGNTIISWIDYNTDRTLLTVFLSYSRPKPVDPVLSVKFDLSEHLRNPVYVGFAASTRGHTEIHQILSWTFHSAFSPARKRLHPHNVSVVGTVPISGLGSSSGSRSISTSKKLDKRVGIGVVVAGSVSFFVGFSILGYVFVRRWRGGRKEKFQNGLVACPRAFNYKELKSATREFHPTRIVGHGSFGTVYKAFFVSSGTIAAVKRLRHSHEGKTEFLAELSIIAGLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDKMLYKDPESGRLLCWSQRVNIALGLASVLVYLHQECEQRVIHRDIKAGNVLLDGNFNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATDKSDAFSYGVVVLEVACGRRPIEREGSKMVNLIEWVWGLHSEGKVIEAADKRLNGEFEEEEMRKLLLLGLSCVNPDSAERPSMRRVLQILSNEAAPLIVPKVKPTLTFSFDLPLTIKDIVSDDEELSTSPSLCEIKID 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00984 670 Gene3D Phosphorylase Kinase; domain 1 320 427 - -
Spst8g00984 670 FunFam L-type lectin-domain containing receptor kinase VIII.1 428 640 - -
Spst8g00984 670 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Spst8g00984 670 ProSiteProfiles Protein kinase domain profile. 352 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00984 670 ProSitePatterns Legume lectins beta-chain signature. 135 141 IPR019825 -
Spst8g00984 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 254 IPR013320 -
Spst8g00984 670 PANTHER - 52 632 - -
Spst8g00984 670 CDD STKc_IRAK 358 622 - -
Spst8g00984 670 Pfam Protein kinase domain 353 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00984 670 SUPERFAMILY Protein kinase-like (PK-like) 336 646 IPR011009 -
Spst8g00984 670 Pfam Legume lectin domain 30 257 IPR001220 GO:0030246
Spst8g00984 670 SMART serkin_6 352 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00984 670 CDD lectin_legume_LecRK_Arcelin_ConA 30 250 IPR001220 GO:0030246
Spst8g00984 670 Gene3D Transferase(Phosphotransferase) domain 1 428 629 - -
Spst8g00984 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Spst8g00984 670 Gene3D - 27 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00984 Spst-Chr8 8555779 8557791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00984 6 657 Receptor kinase-like Gene Family AT5G55830 56.975 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst8g00984 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00984 - - gmx:102668712 962.985