Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00973 ATGGGATCCACTTCCACTACCAGAAGCTTTCAGAAGCCTTTGCCATACTCATCTCTCGTCTCCTCCAGCATCAATGAACCGCTTCAAAGGTTACACCCTTCCTTAGAATATGAATTTACATTTCTTGTTGTTGTGATGGGTTTGCTTCCTCTTCGCTTCTTAGTTCAACGCATGCCTTTCTTCTACAAGCTCGATTCATACTTCATTGGAATTACCACTGCTTTGTTAAACTTGAATTGCACTGTTTCTTTTTCTGGAAATGGAGAAATTTCAAGCTCCTTGAAATGGACCGCAGATTCCCCATGGCCAGTGGAAAATACTTCCGAGGGTGAAATTCATGAGGTGAAATTGGAATTTACTTCAAATCTGTGTTGTTTTCTAAAACCAAACTTCGTTGATTTCAGAGTCACAGTCCTCCTCTGTAGCTCAGAAGAAATGGATGCATTTTCTGCCTTTGCTTCAAATGAAGGCAGTCAAGGGTCGCCATTGACGAGATCCATATATGGCTTCTGCATGGCCAACAATGATGTAAAGGAGCCCTTGCTGTCAGGATCACTGGATGAGACTCAAAAAGCGAAACGGCAGTTAAACAGGAGAAGGTTACTCCGTTCTAGAAGTGCTCCTCACACAGATCTTGTTCCTTCTGAGACACAGAGAAATGAATCTCCTCCTCGAACTACATCCATATTTCAGAATTTACATCCAAGTTTTAGAAGAGTGGCTATCTACCTTACAGTATATTTAGGTGCAGGTGCTTTAATCTTCTACCTTGTCAGGGACCAGATTAAGGGGATGAAAACAGATGGAATTCTTGATGCTTTGTACTTTACAGTTGTTACAATGACCACTGTTGGATATGGAGACCTTGTGCCAGATAGCCACCTTACAAAACTACTTGCATGTGCCTTTGTTTTCTCTGGGATGGCATTGATTGGACTGATTGTAAGCAAAGCAGCAGACTACTTAGTTGAGAAGCAGGAACTTTTGCTAGTTAAAGCTATGCGCATGCACCAAAAAGTTGGTTCAACTGAAATTTTCAGGGAGATTGAAACCAATAAAACAAGATACAAACTTTTTCTAGTCTTTTTCCTCCTTCTGATTCTCATCATTGCGGGGATAAGTTTTTTGGTCACTGTTGAGAAATTGGATGTTATTGATGCATTCTACTGTGTTTGTTCTACAATTACAACCCTTGGTTATGGGGACAAAAGTTTCTCAACACAATCAGGAAGAATATTTGCCGTGTTTTGGATAGTGACTGGTACTATTACTTTAGCTCAGCTTTTACTCTACATTGCTGAGCTAAACACTGAAATCAGACAAAAGGAACTTGTCAAATGGGTACTTACAAGGAAAGTGACCAATTTAGATTTGGAGGCTGCAGATCTTGATGAGGATGGGACTGTTGGGACTGCTGAATTTGTAATTTATAAGCTCAAAGAGATGGGGAAGATTAGTCAAGAAGATATATCACTTGTGATGCAGGAGTTTGAACAGCTTGATGTTGATGATTCTGGTACACTGACAATTTCCGATATAACACTTGCTCAGTCATCTTAG 1560 0.4026 MGSTSTTRSFQKPLPYSSLVSSSINEPLQRLHPSLEYEFTFLVVVMGLLPLRFLVQRMPFFYKLDSYFIGITTALLNLNCTVSFSGNGEISSSLKWTADSPWPVENTSEGEIHEVKLEFTSNLCCFLKPNFVDFRVTVLLCSSEEMDAFSAFASNEGSQGSPLTRSIYGFCMANNDVKEPLLSGSLDETQKAKRQLNRRRLLRSRSAPHTDLVPSETQRNESPPRTTSIFQNLHPSFRRVAIYLTVYLGAGALIFYLVRDQIKGMKTDGILDALYFTVVTMTTVGYGDLVPDSHLTKLLACAFVFSGMALIGLIVSKAADYLVEKQELLLVKAMRMHQKVGSTEIFREIETNKTRYKLFLVFFLLLILIIAGISFLVTVEKLDVIDAFYCVCSTITTLGYGDKSFSTQSGRIFAVFWIVTGTITLAQLLLYIAELNTEIRQKELVKWVLTRKVTNLDLEAADLDEDGTVGTAEFVIYKLKEMGKISQEDISLVMQEFEQLDVDDSGTLTISDITLAQSS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00973 519 FunFam Two-pore potassium channel 1 338 446 - -
Spst8g00973 519 Gene3D - 338 449 - -
Spst8g00973 519 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 242 492 IPR003280 GO:0005267|GO:0016020|GO:0071805
Spst8g00973 519 FunFam Calcium-activated outward-rectifying potassium channel 1 234 329 - -
Spst8g00973 519 SUPERFAMILY EF-hand 421 515 IPR011992 -
Spst8g00973 519 MobiDBLite consensus disorder prediction 210 227 - -
Spst8g00973 519 MobiDBLite consensus disorder prediction 207 227 - -
Spst8g00973 519 ProSitePatterns EF-hand calcium-binding domain. 501 513 IPR018247 -
Spst8g00973 519 Gene3D - 234 328 - -
Spst8g00973 519 SUPERFAMILY Voltage-gated potassium channels 330 455 - -
Spst8g00973 519 SUPERFAMILY Voltage-gated potassium channels 224 338 - -
Spst8g00973 519 Pfam Ion channel 364 435 IPR013099 -
Spst8g00973 519 Pfam Ion channel 242 323 IPR013099 -
Spst8g00973 519 PRINTS Two pore domain K+ channel signature 467 476 IPR003280 GO:0005267|GO:0016020|GO:0071805
Spst8g00973 519 PRINTS Two pore domain K+ channel signature 393 421 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00973 Spst-Chr8 8526223 8528717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00973 216 519 Ion Channels AT5G55630 63.399 4.26e-142 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00973 K05389 - gmx:100777388 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00973 8 8526223 8528717 Spst8g00973 8 8526223 8528717 ECH