Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00969 ATGTGGGTTCATGTGGATTTAGCAGAAGGTGAAAATGGCCATGGTGGCCTTGTGAACTACATTAGTTGGGAAGACTTGCAGGTGGATGAGCAAAGGTTGTCTATGAAATGCCATAACGATCTTCGAGTCATTATTGTTAACAAACACGGTAGGGGACATTCCAAAACTGTTCAAGGGGCCGTGGATATGATTCCTGAAAATAACAAACATAGGGTGAAAATTTACATTTATCCAGGAATATACAGAGAGAAGGTGCGTGTGCCTGTGACCAAGCCTTATGTATCGTTCATAGGGAAAAGAAATCAAACAGCAAGTCCTGTTATTACTTGGAACAGTAAGTCGTCTGACAAAGGCACAAATGGCCAAGCATTGGGCACCTATGATACAGCAACAGTTGGAGTGGACTCAGATTATTTCTGTGCAACTGGGGTCACTTTTGAGAACTCAGTGATTGCAACGGCTGGTGTAAAAGGGATGCAAGGAGTGGCACTGAGGGTGAACAGTGCAAGAGCCATGTTCTATCGAGTGAGGATTAAGGGAACACAGGACAGTCTATTGGACAACACAGGAAATCATTACTTTTTAGAGTGTCGCATTCTAGGAAAAGTTGATTTTATTTGTGGCAGTGCAAAATCACTCTATGAGAAGTGCCGTCTGCAGTCAATAGCGGACAACTTTGGAGCAATAGCAGCACATCATAGGAATTCACCAAATGAAGACACAGGTTTTTCTTTTGTAGGGTGCAGTATTAGAGGAAGTGGCAGAGTATACCTTGGCAGAGCATGGGGGAACTACTCAAGAATTATATACTCCAACTGCAACATGGATGGCATTATTATTCCTGAAGGGTGGTCAGATTGGAATCACTCAGACAGAAAGAAGACTGCAGTGTTTGCTGAGTATCAATGCAAAGGAAGAGGAGCAGATAGAAGGAGCAGGGCACCTTGGTCAAAATCATTGAGCTATAATGACGCAAAGCCTTTCCTTGACAAGAGTTTCATAGATGGAGATCGGTGGCTCAGACTATAG 1029 0.4325 MWVHVDLAEGENGHGGLVNYISWEDLQVDEQRLSMKCHNDLRVIIVNKHGRGHSKTVQGAVDMIPENNKHRVKIYIYPGIYREKVRVPVTKPYVSFIGKRNQTASPVITWNSKSSDKGTNGQALGTYDTATVGVDSDYFCATGVTFENSVIATAGVKGMQGVALRVNSARAMFYRVRIKGTQDSLLDNTGNHYFLECRILGKVDFICGSAKSLYEKCRLQSIADNFGAIAAHHRNSPNEDTGFSFVGCSIRGSGRVYLGRAWGNYSRIIYSNCNMDGIIIPEGWSDWNHSDRKKTAVFAEYQCKGRGADRRSRAPWSKSLSYNDAKPFLDKSFIDGDRWLRL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00969 342 Pfam Pectinesterase 44 337 IPR000070 GO:0030599|GO:0042545
Spst8g00969 342 Gene3D - 40 342 IPR012334 -
Spst8g00969 342 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 38 341 - -
Spst8g00969 342 FunFam Pectinesterase 39 342 - -
Spst8g00969 342 SUPERFAMILY Pectin lyase-like 43 340 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00969 Spst-Chr8 8506913 8508755 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00969 17 294 Carbohydrate Esterase AT5G55590 55.369 7.52e-118 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00969 K01051 - gmx:100804220 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00969 8 8506913 8508755 Spst8g00969 8 8506913 8508755 ECH