Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00962 ATGCTGTCTCTTTTCTCACCCCTTTCCCACATACACTTTTCCTACGATGTTCTCCTCCAACCCGTTTTCCTTCATGGTTTATCCGGCTTCCTCCACCTTTTGCTGCTCATCACGGTTTCACTGTCATGGGTTAGGATCAAATTCAGAATGCGTGTCAGGGTTGAGTCTGAGGAGAAACACGACAACTCCCTCTTCAAAACGACCGTATTTTGTTCTCTGGGTGTTTCTGCTTTCAGTTTTCTCCTCTGTTTGTTCAATTACTCTTGTTGGTACTCTAGTGGCTGGTCAGAAGAAAAGCTCGTGACCCTTATGGATTTGGCGCTAAAAACAGTTGCATGGGGCGTTGTTTGTGTTTGCTTGCAAAAGGAATTCTTCAGTTCTGGCGAAAAAAGAGGCGTTGCTTTGCCAACTCAGTACTTGGTTTCTGATGTGGTTTCCACTTGTTTTGGTTTGTTATTCTGTTACGTGGGGTATTTTGTGAAAAACAAAGGTCCCGTGCGAGAAAAAGAAAATAACAGCACTCAGGAACCTCTTTTGGATAGTGAGACAAAGATTGATGATGCCTTGGAGTCAAAAGAGACCAAGGGTGGGGATACTGTTACCCCTTTCTCATATGCTGGCATTTTGAGCCATCTTTCCTTCTCTTGGGTGGGTCCTCTTATAGCTGTTGGCAATAAGAAGACCTTGGACCTGGAGGATGTTCCTCGACTAGGCAGCAGAGACAGTGTACTTGAAACTTTTCCTGGGTTCAGAGATAAACTTGAGACTGATTGTGGGGCAATTAAAAATGTCACCACACTAAAGTTGGTGAAGTCGTTAGTAGTGTCAGCATGGAAGGAGATTCTTTTCACAGCTTTTCTTGCGTTGTTATACACTTTGGCTTCTTATGTTGGTCCTTTTCTTCTTGATGATTTTGTTCAGTACCTTCATGGACAACGACTTTATGAAAACCAGGGCTTTGTTTTGATTTCAGCGTTTTTCTGTGCAAAGATGGTAGAGTGTCTGTCTCAATTGCATCGGTGCTTTAGGTTGCAGCAAGTTGGACTTGGAATTCGAGCACTGCTTGTCACTATGATTTATAGCAAGGCTCTGACTCTTTCTTGTCAGTCAAAGCAGGGCCACACTTCTGGAGAAATAGTCAATTTCATGGCTGTTGATGCAGAAAGAGTGGGTGTCTTTAGTTGGCATATACATGATTTGTGGATGGTGGCTTTGCAAGCTACATTGGCATTATTGATTTTGTACAAAAACCTTGGGCTGGCTTCAATTGCTGCTTTTGTTGCAACTATTGTTGTTATGATGACAAATGTTCCCTTGGGATCATTGCAACAGAAGTTTCAAAAGAAGTTGATGGTGAAAACTGAGCAAGGGGTCCCCCTTGAATCGGGGAAGATCTTGTCTGCACTCGCAACATTCGGGATTCTTCAAGAGCCCATTTATAGCCTTCCGGGTACAATTTCGACGATAGCACGAACTAAAGTGTCTCTTGATAGGATTGCATCATTCCTTCGTCTGGATGAGTTACCCGCTGATGCTGTAGAGAAGCTTCCCCGGGGTAGTTCTGATACAACAATTGAAGTAGTTGATGGAAACTTTTCTTGGGAATTATCTTCCCCTAACCCAACATTGAAAAATATAAATCTTAAAGTTTTTACAGGGATGAGGGTTGCTGTTTGTGGTACTGTTGGATCGGGCAAGTCTACTTTACTTTCTTGTTTCTTGGGAGAAGTACCAAAGATATCGGGTATCGTTAGGGTTTGTGGAACAAAGGCCTATGTCACTCAATCTCCATGGATACAAAGTGGTAAGATAGAGGATAATATATTGTTTGGGAAACAAATGGATAGGGAAAAGTATGAGAAGGTACTTCAAGCGTGTTCCCTGAATAAGGATCTGGAGATTTTGTCATTTGGTGATCAGACAATTGTAGGAGAGCGCTCTCACCTCTTCAAGGAATGCTTGTTGGGCCTTTTAAGTACAAAGACAGTAGTTTATGTCACTCATCAAGTAGAGTTCTTACCTGCTGCTGATCTTATATTGGTTATGAAAGATGGGAAAATTACTCAATGTGGAAATTATTCTGATCTACTTAACAGTGGAGCTGATTTTGTGGAACTTGTTGGTGCACACAAAAAAGCTTTGTCTACACTAGATTCATTAGATGGAGCAGCATTATCTAATGAAATAAGCACCTTGGAAGAAGATGCAAATGTCTCTAGCACGCAAGGTTTTAAAGAAGAGGAGGCAAGCAAAGATGAACAAAATGGTATAACAGACAACAAAAGTGAACCTAAAGGCCAACTTGTTCAGGAAGAAGAAAGGGAGAAAGGTAAAAAATGTATCACAGCAGCATATGGAGGAGCTCTTGTACCATTCATATTGTTGGCTCAGATTCTTTTTCAAGCTCTTCAAATCGGAAGTAATTACTGGATGGCTTGGGCGACTCCTATCTCAACTGATGTGGAAGCACCTGTTGATGGAACAACTCTTATTGTAGTCTATGTTAGTTTGGCCATTGGAAGTTCTTTATGCATCCTTGCCAGAGAAATGCTTCTTGTCACAACTGGTTATAAAACAGCTACTATACTCTTCAATAAAATGCACTATTGCATTTTTCGTGCTCCAATGGCTTTTTTCGATTCCACTCCAAGCGGGCAAATTCTTAACAGAGTTTCAACGGATCAAAGTGCACTGGATACAAACATTCCTTATCAAATTGCATCATCTGCCTTCATTATGATCCAACTTCTGGGAATTATTGCAGTGATGTCTCAGGCTGCATGGCAAATTTTCGTTGTCTTTATACCTGTGATCACAGTCAGCATTTGCTATCAGCAATATTATATTCCATCAGCTCGAGAACTATCACGTTTAGTTGGTATCTGCAAAGCCCCAATCATTCAACACTTTTCTGAAACAATTTCGGGAGCTTCAACCATTAGAAGCTTTGAACAGCAATCAAGATTTCAGGAAACAAATATGAAACTGACTGATGGGTATTCACGGCCAAAGTTCAACGTTGCTGCTGCCATGGAATGGTTGTGCTTCCGCTTAGATATGTTGTCTTCTATCATATTTGCCTTTTTATTATTATTCTTGATATCTATTCCACCGGGATTCATAGATCCAGGCCTTGCTGGCTTGGCGGTTACATATGGGCTAAATTTGAACACGATACAAGCTTGGATGATATGGAATCTCTGCAAAATGGAGAACAAAATTATATCAGTAGAAAGAATACTTCAGTATACTAGTATTCCTAGTGAGCCTCCCCTTGTTATAGATGAAAACCAGCCAGATTCTTCTTGGCCCTCTAATGGCGAGGTTGATATACAAGATTTGCAGGTTCGTTATGCTCCACATCTTCCAGTCGTGTTGCGTGGTCCTACATGCAAATTTAGCGGAGGACTGAAAACTAGCATTGTTGGGAGGACAGGAAGTGGTAAATCCACTCTCATACAAACACTTTTTCGAATTGTTGAGCCTGCTGTCGGGAAAGTTATGATTGACAACATCAACATCTCTTTAATTGGACTTCATGATTTGAGGTCAAGACTGAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGGACAGTGAGAGATAATCTGGATCCCCTGGAAGAACACTCTGATGAACAAATTTGGGAGGCCTTGGATAAGTGTCAACTTGGAGACGAAGTTAGAAAGAAAGAAGGAAAGCTTGACTGCAAAGTTAGTGAGAATGGTGAGAATTGGAGTATGGGTCAGAGACAGTTGGTCTGCCTTGGCAGGGTGTTGCTTAAGAAAAGCAAGGTTGTGGTTCTTGATGAAGCCACTGCATCAGTGGATACAGCTACGGATAATTTGATTCAGCAAACTCTTAAGCAACATTTCTCTCTCTCCACAATTATTACCATTGCACACCGAATAACTTCTGTGCTTGACAGTGATATGGTTCTTCTTCTTAGTCAAGGACTTGTTGAAGAGTACGACACCCCAACAAAGTTGCTAGAGAATAAGTCATCATCATTTGCTGAACTTGTTACTGAGTATACAAGGAGGTCCAACTCCAGCTTTTAG 4062 0.4131 MLSLFSPLSHIHFSYDVLLQPVFLHGLSGFLHLLLLITVSLSWVRIKFRMRVRVESEEKHDNSLFKTTVFCSLGVSAFSFLLCLFNYSCWYSSGWSEEKLVTLMDLALKTVAWGVVCVCLQKEFFSSGEKRGVALPTQYLVSDVVSTCFGLLFCYVGYFVKNKGPVREKENNSTQEPLLDSETKIDDALESKETKGGDTVTPFSYAGILSHLSFSWVGPLIAVGNKKTLDLEDVPRLGSRDSVLETFPGFRDKLETDCGAIKNVTTLKLVKSLVVSAWKEILFTAFLALLYTLASYVGPFLLDDFVQYLHGQRLYENQGFVLISAFFCAKMVECLSQLHRCFRLQQVGLGIRALLVTMIYSKALTLSCQSKQGHTSGEIVNFMAVDAERVGVFSWHIHDLWMVALQATLALLILYKNLGLASIAAFVATIVVMMTNVPLGSLQQKFQKKLMVKTEQGVPLESGKILSALATFGILQEPIYSLPGTISTIARTKVSLDRIASFLRLDELPADAVEKLPRGSSDTTIEVVDGNFSWELSSPNPTLKNINLKVFTGMRVAVCGTVGSGKSTLLSCFLGEVPKISGIVRVCGTKAYVTQSPWIQSGKIEDNILFGKQMDREKYEKVLQACSLNKDLEILSFGDQTIVGERSHLFKECLLGLLSTKTVVYVTHQVEFLPAADLILVMKDGKITQCGNYSDLLNSGADFVELVGAHKKALSTLDSLDGAALSNEISTLEEDANVSSTQGFKEEEASKDEQNGITDNKSEPKGQLVQEEEREKGKKCITAAYGGALVPFILLAQILFQALQIGSNYWMAWATPISTDVEAPVDGTTLIVVYVSLAIGSSLCILAREMLLVTTGYKTATILFNKMHYCIFRAPMAFFDSTPSGQILNRVSTDQSALDTNIPYQIASSAFIMIQLLGIIAVMSQAAWQIFVVFIPVITVSICYQQYYIPSARELSRLVGICKAPIIQHFSETISGASTIRSFEQQSRFQETNMKLTDGYSRPKFNVAAAMEWLCFRLDMLSSIIFAFLLLFLISIPPGFIDPGLAGLAVTYGLNLNTIQAWMIWNLCKMENKIISVERILQYTSIPSEPPLVIDENQPDSSWPSNGEVDIQDLQVRYAPHLPVVLRGPTCKFSGGLKTSIVGRTGSGKSTLIQTLFRIVEPAVGKVMIDNINISLIGLHDLRSRLSIIPQDPTMFEGTVRDNLDPLEEHSDEQIWEALDKCQLGDEVRKKEGKLDCKVSENGENWSMGQRQLVCLGRVLLKKSKVVVLDEATASVDTATDNLIQQTLKQHFSLSTIITIAHRITSVLDSDMVLLLSQGLVEEYDTPTKLLENKSSSFAELVTEYTRRSNSSF 1353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00962 1353 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 525 709 IPR003439 GO:0005524
Spst8g00962 1353 SMART AAA_5 552 686 IPR003593 GO:0016887
Spst8g00962 1353 SMART AAA_5 1135 1320 IPR003593 GO:0016887
Spst8g00962 1353 FunFam ABC transporter C family member 10 265 457 - -
Spst8g00962 1353 SUPERFAMILY ABC transporter transmembrane region 273 511 IPR036640 GO:0005524|GO:0016020
Spst8g00962 1353 FunFam ABC transporter C family member 5 760 1090 - -
Spst8g00962 1353 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 282 456 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst8g00962 1353 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 792 1072 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst8g00962 1353 Gene3D ABC transporter type 1, transmembrane domain 120 509 IPR036640 GO:0005524|GO:0016020
Spst8g00962 1353 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1109 1343 IPR003439 GO:0005524
Spst8g00962 1353 FunFam ABC transporter C family member 3 1092 1344 - -
Spst8g00962 1353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 522 708 IPR027417 -
Spst8g00962 1353 Gene3D ABC transporter type 1, transmembrane domain 785 1091 IPR036640 GO:0005524|GO:0016020
Spst8g00962 1353 Gene3D - 510 646 IPR027417 -
Spst8g00962 1353 Gene3D - 647 721 IPR027417 -
Spst8g00962 1353 MobiDBLite consensus disorder prediction 735 773 - -
Spst8g00962 1353 Pfam ABC transporter 543 593 IPR003439 GO:0005524
Spst8g00962 1353 Gene3D - 1092 1345 IPR027417 -
Spst8g00962 1353 MobiDBLite consensus disorder prediction 745 773 - -
Spst8g00962 1353 FunFam Uncharacterized protein 500 650 - -
Spst8g00962 1353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1101 1341 IPR027417 -
Spst8g00962 1353 SUPERFAMILY ABC transporter transmembrane region 791 1091 IPR036640 GO:0005524|GO:0016020
Spst8g00962 1353 CDD ABC_6TM_ABCC_D2 790 1084 IPR044726 GO:0140359
Spst8g00962 1353 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 647 1346 - -
Spst8g00962 1353 CDD ABCC_MRP_domain2 1107 1327 - -
Spst8g00962 1353 Pfam ABC transporter transmembrane region 282 455 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst8g00962 1353 Pfam ABC transporter transmembrane region 792 1033 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst8g00962 1353 Pfam ABC transporter 1130 1274 IPR003439 GO:0005524
Spst8g00962 1353 CDD ABC_6TM_ABCC_D1 283 499 IPR044746 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00962 Spst-Chr8 8453393 8459464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00962 1107 1342 Calmodulin-binding Proteins AT2G36910 28.033 4.32e-27 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00962 - K05666 gmx:100811245 2024.59