Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00959 ATGCTGTCTCTTTTCTCACCCCTTTCCCACGTACACTTTTCCTACGATGTTCTCCTCCAACCCGTTTTCCTTCATGGTTTATCCGGCTTCCTCCACCTTTTGCTGCTCATCGCGGTTTCACTGTCATGGGTTAGGATCAAATTCAGAATGCGTGTCAGGGTTGAGTCTGAGGAGAAACACGACAACTCCCTCTTCAAAACGACCGTATGTTGTTCTCTGGGTGTTTCTGCTTTCAGTTTTCTCCTCTGTTTGTTCAATTACTCTTGTTGGTACTCTAGTGGCTGGTCAGAAGAAAAGCTCGTGACCCTTATGGATTTGGCGCTAAAAACAGTTGCATGGGGCGTTGTTTGTGTTTGCTTGCAAAAGGAATTCTTCAGTTCTGGCGAAAAAAGGTTCTCATTCCTCTTCAAAGCTTGGTGCATCTTCTACCTCCTTGTTTCTTGTTATTGCTTCGTGGTGGACATTATTGTATCAGAGAGAGGCGTTGCTTTGCCAACTCAGTACTTGGTTTCTGATGTGGTTTCCACTTGTTTTGAGACCAAGGGTGGGGATACTGTTACCCCTTTCTCATATGCTGGCATTTTGAGCCATCTTTCCTTCTCTTGGGTGGGTCCTCTTATAGCTGTTGGCAATAAGAAGACCTTGGACCTGGAGGATGTTCCTCGACTAGGCAGCAGAGACAGTGTACTTGAAACTTTTCCTGGGTTCAGAGATAAACTTGAGACTGATTGTGGGGCAATTAAAAATGTCACCACACTAAAGTTGGTGAAGTCGTTAGTAGTGTCAGCATGGAAGGAGATTCTTTTCACAGCTTTTCTTGCGTTGTTATACACTTTGGCTTCTTATGTTGGTCCTTATCTTCTTGATGATTTTGTTCAGTACCTTCATGGACAACGACTTTATGAAAACCAGGGCTTTGTTTTGATTTCAGCGTTTTTCTGTGCAAAGATGGTAGAGTGTCTGTCTCAATTGCATCGGTGCTTTAGGTTGCAGCAAGTTGGACTTGGAATTCGAGCACTGCTTGTCACTATGATTTATAGCAAGGCTCTGACTCTTTCTTGTCAGTCAAAGCAGGGCCACACTTCTGGAGAAATAGTCAATTTCATGGCTGTTGATGCAGAAAGAGTGGGTGTCTTTAGTTGGCATATACATGATTTGTGGATGGTGGCTTTGCAAGCTACATTGGCATTATTGATTTTGTACAAAAACATTGGGCTGGCTTCAATTGCTGCTTTTGTTGCAACTATTGTTGTTATGATGACAAATGTTCCCTTGGGATCATTGCAACAGAAGTTTCAAAAGAAGTTGATGGTGTCGAAAGATAAAAGAATGAAAGCCACATCCGAGATTTTAAGGCATATGAAGATTTTAAAACTACAAGGATGGGAAATGAAGTTTTTATCAAAAATAACTGAGCTCAGGAAAACTGAGCAAGGTTGGTTAAAAAAATGTGCTTATACTTCATCCATGACAACGTTTCTATTTCGGGGTGCCCCCACATTTGTTGCCGTGGTTACTTTTGGTACTTGTATGCTTATAGGGGTCCCCCTTGAATCGGGGAAGATCTTGTCTGCACTCGCAACATTCGGGATTCTTCAAGAGCCCATTTATAGCCTTCCGGGTACAATTTCGACGATAGCACGAACTAAAGTGTCTCTTGATAGGATTACATCATTCCTTCGTCTGGATGAGTTACCCGCTGATGCTGTAGAGAAGCTTCCCCGGGGTAGTTCTGATACAACAATTGAAGTAGTTGATGGAAACTTTTCTTGGGAATTATCTTCCCCTAACCCAACATTGAAAAATATAAACCTTAAAGTTTTTACAGGGATGAGGGTTGCTGTTTGTGGTACTGTTGGATCGGGCAAGTCTACTTTACTTTCTTGTTTCTTGGGAGAAGTACCAAAGATATCGGGTATCGTTAGGGTTTGTGGAACAAAGGCCTATGTCACTCAATCTCCATGGATACAAAGTGGTAAGATAGAGGATAATATATTGTTTGGGAAACAAATGGATAGGGAAAAGTATGAGAAGGTACTTCAAGCGTGTTCCCTGAATAAGGATCTGGAGATTTTGTCATTTGGTGATCAGACAATTGTAGGAGAGCGTGGAATAAATTTGAGTGGTGGACAAAAACAAAGAATACAGATTGCACGTGCGCTCTACCAAGATGCTGATATATATCTATTTGATGATCCCGTTAGTGCTGTGGATGCTCACACAGGCTCTCACCTCTTCAAGGAATGCTTGTTGGGCCTTTTAAGTACAAAGACAGTAGTTTATGTCACTCATCAAGTAGAGTTCTTACCTGCTGCTGATCTTATATTGGTTATGAAAGATGGGAAAATTACTCAATGTGGAAATTATTCTGATCTACTTGACAGTGGAGCTGATTTTGTGGAACTTGTTGGTGCACACAAAAAAGCTTTGTCTACACTAGATTCATTAGATGGAGCAGCAGTATCTAATGAAATAAGCACCTTGGAAGAAGATGCAAATGTCTCTAGCACGCAAGGTTTTAAAGAAGAGGAGGCAAGCAAAGATGAACAAAATGGTATAACAGACAACAAAAGTGAACCTAAAGGCCAACTTGTTCAGGAAGAAGAAAGGGAGAAAGGTAAAGTTGGGTTTTCAGTGTATTGGAAATGTATCACAGCAGCATATGGAGGAGCTCTTGTCCCATTCATATTGTTGGCTCATATTCTTTTTCAAGCTCTTCAAATCGGAGGTAATTACTGGATGGCTTGGGCGACTCCTATCTCAACTGATGTGGAAGCACCTGTTGATGGAACAACTCTTATTGTAGTCTATGTTAGTTTGGCCATTGGAAGTTCTTTATGCATCCTTGCCAGAGCAATGCTTCTTGTCACAACTGGTTATAAAACAGCTACTATACTCTTCAATAAAATGCACTATTGCATTTTTCGTGCTCCAATGGCTTTTTTCGATTCCACTCCAAGCGGGCGAATTCTTAACAGAGTTTCAACGGATCAAAGTGCACTGGATACAAACATTCCTTATCAAATTGCATCATCTGCCTTCATTATGATCCAACTTCTGGGAATTATTGCAGTGATGTCTCAGGCTGCATGGCAAATTTTCGTTGTCTTTATACCTGTGATCATAGTCAGCATTTGCTATCAGCAATATTATATTCCATCAGCTCGAGAACTATCACGTTTAGTTGGTATCTGCAAAGCCCCAATCATTCAACACTTTTCTGAAACAATTTCGGGAGCTTCAACCATTAGAAGCTTTGAACAGCAATCAAGATTTCAGGAAACAAATATGAAACTGACTGATGGGTATTCACGGCCAAAGTTCAACGTTGCTGCTGCCATGGAATGGTTGTGCTTCCGCTTAGATATGTTGTCTTCTATCATATTTGCCTTTTTATTATTATTCTTGATATCTATTCCACCGGGATTCATAGATCCAGGTGTGTTATTCCAATCTGGCCTTGCTGGCTTGGCGGTTACATACGGGCTAAATTTGAACACGATACAAGCTTGGATGATATGGAATCTCTGCAAAATGGAGAACAAAATTATATCAGTAGAAAGAATACTTCAGTATACTAGTATTCCTAGTGACCCTCCCCTTGTTATAGATGAAAACCAGCCAGATTCTTCTTGGCCCTCTAATGGCGAGGTTGATATACAAGATTTGCAGGTTCGTTATGCTCCACATCTTCCTGTCGTGTTGCGTGGTCTTACATGCAAATTTAGCGGAGGACTGAAAACTAGCATTGTTGGGAGGACAGGAAGTGGTAAATCCACTCTCATACAAACACTTTTTCGAATTGTTGAGCCTGCTGTCGGGAAAGTTATGATTGACAACATCAACATCTCTTTAATTGGACTTCATGATTTGAGGTCAAGACTGAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGGACAGTGAGAGATAATCTGGATCCCCTGGAAGAACACTCTGATGAACAAATTTGGGAGGTTAGTGAGAATGGTGAGAATTGGAGTATGGGTCAGAGACAGTTGGTCTGCCTTGGCAGGGTGTTGCTTAAGAAAAGCAAGGTTGTGGTTCTTGATGAAGCCACTGCATCAGTGGATACAGCTACGGATAATTTGATTCAGCAAACTCTTAGGCAACATTTCTCTGGCTCCACAATTATTACCATTGCACACCGAATAACTTCTGTGCTTGACAGTGATATGGTTCTTCTTCTTAGTCAAGGACTTGTTGAAGAGTACGACACCCCAACAAAGTTGCTAGAGAATAAGTCATCATCATTTGCTGAACTTGTTACTGAGTATACAAGGAGGTCCAACTCCAGCTTTTAG 4326 0.4129 MLSLFSPLSHVHFSYDVLLQPVFLHGLSGFLHLLLLIAVSLSWVRIKFRMRVRVESEEKHDNSLFKTTVCCSLGVSAFSFLLCLFNYSCWYSSGWSEEKLVTLMDLALKTVAWGVVCVCLQKEFFSSGEKRFSFLFKAWCIFYLLVSCYCFVVDIIVSERGVALPTQYLVSDVVSTCFETKGGDTVTPFSYAGILSHLSFSWVGPLIAVGNKKTLDLEDVPRLGSRDSVLETFPGFRDKLETDCGAIKNVTTLKLVKSLVVSAWKEILFTAFLALLYTLASYVGPYLLDDFVQYLHGQRLYENQGFVLISAFFCAKMVECLSQLHRCFRLQQVGLGIRALLVTMIYSKALTLSCQSKQGHTSGEIVNFMAVDAERVGVFSWHIHDLWMVALQATLALLILYKNIGLASIAAFVATIVVMMTNVPLGSLQQKFQKKLMVSKDKRMKATSEILRHMKILKLQGWEMKFLSKITELRKTEQGWLKKCAYTSSMTTFLFRGAPTFVAVVTFGTCMLIGVPLESGKILSALATFGILQEPIYSLPGTISTIARTKVSLDRITSFLRLDELPADAVEKLPRGSSDTTIEVVDGNFSWELSSPNPTLKNINLKVFTGMRVAVCGTVGSGKSTLLSCFLGEVPKISGIVRVCGTKAYVTQSPWIQSGKIEDNILFGKQMDREKYEKVLQACSLNKDLEILSFGDQTIVGERGINLSGGQKQRIQIARALYQDADIYLFDDPVSAVDAHTGSHLFKECLLGLLSTKTVVYVTHQVEFLPAADLILVMKDGKITQCGNYSDLLDSGADFVELVGAHKKALSTLDSLDGAAVSNEISTLEEDANVSSTQGFKEEEASKDEQNGITDNKSEPKGQLVQEEEREKGKVGFSVYWKCITAAYGGALVPFILLAHILFQALQIGGNYWMAWATPISTDVEAPVDGTTLIVVYVSLAIGSSLCILARAMLLVTTGYKTATILFNKMHYCIFRAPMAFFDSTPSGRILNRVSTDQSALDTNIPYQIASSAFIMIQLLGIIAVMSQAAWQIFVVFIPVIIVSICYQQYYIPSARELSRLVGICKAPIIQHFSETISGASTIRSFEQQSRFQETNMKLTDGYSRPKFNVAAAMEWLCFRLDMLSSIIFAFLLLFLISIPPGFIDPGVLFQSGLAGLAVTYGLNLNTIQAWMIWNLCKMENKIISVERILQYTSIPSDPPLVIDENQPDSSWPSNGEVDIQDLQVRYAPHLPVVLRGLTCKFSGGLKTSIVGRTGSGKSTLIQTLFRIVEPAVGKVMIDNINISLIGLHDLRSRLSIIPQDPTMFEGTVRDNLDPLEEHSDEQIWEVSENGENWSMGQRQLVCLGRVLLKKSKVVVLDEATASVDTATDNLIQQTLRQHFSGSTIITIAHRITSVLDSDMVLLLSQGLVEEYDTPTKLLENKSSSFAELVTEYTRRSNSSF 1441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00959 1441 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1218 1431 IPR003439 GO:0005524
Spst8g00959 1441 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 582 805 IPR003439 GO:0005524
Spst8g00959 1441 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 268 548 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst8g00959 1441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 579 804 IPR027417 -
Spst8g00959 1441 CDD ABC_6TM_ABCC_D2 893 1193 IPR044726 GO:0140359
Spst8g00959 1441 SUPERFAMILY ABC transporter transmembrane region 894 1200 IPR036640 GO:0005524|GO:0016020
Spst8g00959 1441 ProSitePatterns ABC transporters family signature. 707 721 IPR017871 GO:0005524|GO:0016887
Spst8g00959 1441 FunFam ABC transporter C family member 5 856 1199 - -
Spst8g00959 1441 Gene3D - 1201 1433 IPR027417 -
Spst8g00959 1441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1210 1429 IPR027417 -
Spst8g00959 1441 FunFam ABC transporter C family member 10 251 564 - -
Spst8g00959 1441 MobiDBLite consensus disorder prediction 831 869 - -
Spst8g00959 1441 SUPERFAMILY ABC transporter transmembrane region 258 568 IPR036640 GO:0005524|GO:0016020
Spst8g00959 1441 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 190 1434 - -
Spst8g00959 1441 CDD ABC_6TM_ABCC_D1 269 556 IPR044746 GO:0140359
Spst8g00959 1441 CDD ABCC_MRP_domain1 582 782 - -
Spst8g00959 1441 Pfam ABC transporter 1236 1362 IPR003439 GO:0005524
Spst8g00959 1441 Pfam ABC transporter transmembrane region 895 1136 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst8g00959 1441 Pfam ABC transporter transmembrane region 268 535 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst8g00959 1441 CDD ABCC_MRP_domain2 1216 1415 - -
Spst8g00959 1441 SMART AAA_5 1244 1408 IPR003593 GO:0016887
Spst8g00959 1441 SMART AAA_5 609 782 IPR003593 GO:0016887
Spst8g00959 1441 MobiDBLite consensus disorder prediction 841 869 - -
Spst8g00959 1441 Gene3D - 564 818 IPR027417 -
Spst8g00959 1441 Gene3D ABC transporter type 1, transmembrane domain 854 1198 IPR036640 GO:0005524|GO:0016020
Spst8g00959 1441 Gene3D ABC transporter type 1, transmembrane domain 247 563 IPR036640 GO:0005524|GO:0016020
Spst8g00959 1441 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 895 1164 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst8g00959 1441 FunFam ABC transporter C family member 5 567 814 - -
Spst8g00959 1441 Pfam ABC transporter 600 734 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00959 Spst-Chr8 8435057 8440693 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00959 582 812 Calmodulin-binding Proteins AT2G36910 30.279 3.16e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00959 - K05666 gmx:100777836 2320.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00959 8 8435057 8440693 Spst8g00959 8 8435057 8440693 ECH