Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00952 ATGGCTGCTTCTATGTCTCTCTATCCCTATAATCCCCTGCTATATTTTTCGACTCCTTCGTGTTTTCGTTCTCAACTTCGAAACTTGGAGAGAGGGCATTTGGGTTCTGCAAGGTTGAAGCGTTTGGTGAAACTTGCAGCACATTCAAATCCAAAGATTCTCAAGACCAACAGGAAGTCAAAGTATGGAGATGCACTGTCGTTGTACGATAGTGATGAAGACGATGAAGAAATGGACGAAGACGACGACGAAGATGATGATGATTGGCTTTCAGATGAGGAATTTGCGGAGCCAGCTAAATTTGATGTTAGTAACAAGAGATTGAAGTCGAAGGCGGTTAAAAGAAAAGATAGAGAGCGGGAGTGGGAGTGGGGTTTGAGATCGTTTGACAATGAACAAAGCATTAGATTGCCTAGAAGCGAGAGAGTGGCATCTTTACAACGAAATGAGAGTGGAAATGTAGTAAATGGTGATACGGTTAGTAGAAATGTAAAGAATAAAAAATATCCGCGGTTGTCCGAAGAGATTCCTTTGGATTTGAAATGGTTACCACTTCTTGATTACTTAAGCACCTTTGGAATGAAGGAATCACACTTTATCCAAATATATGAGAGGCACATGCAAGCACTTCAAATTAATGTTGGTTCTGCACAGGAAAGGTTAGAATACTTAATGAGTGTTGGAGTTAAACATAGAGATGTAAGAAGAATTCTTTTGAGGCAGCCACAAATTCTAGAGTACACAGTGGAGAACAATTTGAAATCTCGTGTTGCTTTCTTGAGGGCCCTAGGCATACCCAATTCTAGAATGGGGCAAATCATTGCTGCCGCTCCATCCTTGTTCTCTTACAGTGTTGAGAATTCGTTAAAACCTACAGTTAGATATTTAGTTGAGGAAGTCGGCATCAAGGAAAAAGATTTGGGGAAGGTCATTCAGCTTAGTCCCCAAATTCTTGTGCAGAGAATTGACATTTCATGGAATATGCGTTATATGTTTCTTACCAAGGAGTTGGGTGCACCCAGAGATAGCATTGTGAAGATGGTGACAAAACATCCCCAACTTCTCCATTACAGCATAGATGACGGATTACTTCCAAGAATAAATTTCCTAAGGAGCATAGGAATGAAAAATTCAGATATCTTGAAAGTCTTGACTAGTCTTACACAGGTGCTATCTCTGTCCTTGGAGGAGAATCTAAAGCCCAAATATTTGTACTTGGTTAATGAACTTAACAATGAGGTGCAATCCTTGACCAAATACCCAATGTATCTGAGTTTATCCTTGGACCAGAGGATTCGGCCTCGTCATAGGTTCCTAGTTTCCCTAAAGAAAGCTCCAAAAGGACCATTTCCCCTTGGATCTCTAGTTCCAACTGATGAATGCTTTTGCCAACAGTGGGCTGGAACAAGTTTAGATAAATATTTGGCATTCCGTCAGAGATTATTACTTCAAAAGTTTGCTGAAAAATATGAAAGAAAAATGTGA 1485 0.4007 MAASMSLYPYNPLLYFSTPSCFRSQLRNLERGHLGSARLKRLVKLAAHSNPKILKTNRKSKYGDALSLYDSDEDDEEMDEDDDEDDDDWLSDEEFAEPAKFDVSNKRLKSKAVKRKDREREWEWGLRSFDNEQSIRLPRSERVASLQRNESGNVVNGDTVSRNVKNKKYPRLSEEIPLDLKWLPLLDYLSTFGMKESHFIQIYERHMQALQINVGSAQERLEYLMSVGVKHRDVRRILLRQPQILEYTVENNLKSRVAFLRALGIPNSRMGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVIQLSPQILVQRIDISWNMRYMFLTKELGAPRDSIVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMKNSDILKVLTSLTQVLSLSLEENLKPKYLYLVNELNNEVQSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDECFCQQWAGTSLDKYLAFRQRLLLQKFAEKYERKM 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00952 494 SMART mt_12 381 413 IPR003690 GO:0003690|GO:0006355
Spst8g00952 494 SMART mt_12 414 445 IPR003690 GO:0003690|GO:0006355
Spst8g00952 494 SMART mt_12 200 230 IPR003690 GO:0003690|GO:0006355
Spst8g00952 494 SMART mt_12 235 266 IPR003690 GO:0003690|GO:0006355
Spst8g00952 494 SMART mt_12 308 340 IPR003690 GO:0003690|GO:0006355
Spst8g00952 494 SMART mt_12 345 376 IPR003690 GO:0003690|GO:0006355
Spst8g00952 494 SMART mt_12 271 303 IPR003690 GO:0003690|GO:0006355
Spst8g00952 494 Gene3D Transcription termination factor 3, mitochondrial 244 481 IPR038538 -
Spst8g00952 494 PANTHER CGI-12 PROTEIN-RELATED 184 465 IPR003690 GO:0003690|GO:0006355
Spst8g00952 494 FunFam Transcription termination factor MTERF9, chloroplastic 246 481 - -
Spst8g00952 494 Coils Coil 200 220 - -
Spst8g00952 494 MobiDBLite consensus disorder prediction 69 89 - -
Spst8g00952 494 Pfam mTERF 249 441 IPR003690 GO:0003690|GO:0006355
Spst8g00952 494 Pfam mTERF 187 260 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Spst8g00952 mTERF 8e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00952 K15031 - gmx:102660933 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00952 8 8384562 8386558 Spst8g00952 8 8384562 8386558 ECH