Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00945 ATGGGATCAAATTGTTGGAGCGGAGTAAGCTTATCTTTTTCTGCCGAAAGCTGCAGAATTTCGTGCTTTTTCTCCGTTGGGGTTAAACAATCGGTTCTCTTCATGATGCCGTGTGTTAACCCTGACCCATTAGACAAAGATTCTGAGCCATTTGTTGAGACCGATCCAACTGGTCGCTATGGTAGATACAGTGAGTTACTTGGGTGTGGTGCTGTGAAGAAAGTGTACCGTGCATTTGATCAGGAAGAAGGAATAGAGGTGGCTTGGAACCAAGTGAAGCTGAGGAACTTCTGTGATGACCCTACCATGGTGGATAGACTTTACTCTGAAGTGAGGTTGCTCAGAAGCTTGACCAACAAAAACATCATTGCACTTTACAATGTGTGGACCGATGACCAGCGTAACACTTTGAATTTCATCACTGAGGTTTGTACCAGTGGCGATTTGAGGGAGTACAGGAAGAGGCACAAGCATGTTTCCAAGAAGGCCCTCAAGAAGTGGTCTAAGCAGATTTTGAAAGGGTTGAATTATCTGCACTTGCATGATCCCTGCATTATTCACAGAGATCTCAATTGTAGCAATGTGTTTGTCAATGGGAATACTGGCCAGGTTAAGATCGGTGACTTGGGTTTGGCAGCAATTGTGGGCAAGAACCATTGTGCTCACACGATTCTTGGCACACCAGAATTCATGGCTCCGGAGTTATACGATGAAGACTACACAGAGTTGGTGGACATTTATTCATTTGGTATGTGTGTGCTAGAAATGGTGACACTGGAAGTTCCTTATAGTGAATGTGACAATATTGCTAAGATATACAAGAAGGTGTGTTCTGGAGTTAGACCTGCAGCCCTGAACAAGGTCAAAGATCCAGAGGTGAAGGCCTTCATTGAGAAGTGCCTTGCTCAGCCAAGAGCTAGACCTTCTGCAGCTGAGCTTCTGAAAGATCCCTTCTTTGATGAGATCGTCGATGATGACGAAAGTGATGACTGTGCTTGTTCTTACCAGGAAAATTGTCCTTAG 1023 0.4457 MGSNCWSGVSLSFSAESCRISCFFSVGVKQSVLFMMPCVNPDPLDKDSEPFVETDPTGRYGRYSELLGCGAVKKVYRAFDQEEGIEVAWNQVKLRNFCDDPTMVDRLYSEVRLLRSLTNKNIIALYNVWTDDQRNTLNFITEVCTSGDLREYRKRHKHVSKKALKKWSKQILKGLNYLHLHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKNHCAHTILGTPEFMAPELYDEDYTELVDIYSFGMCVLEMVTLEVPYSECDNIAKIYKKVCSGVRPAALNKVKDPEVKAFIEKCLAQPRARPSAAELLKDPFFDEIVDDDESDDCACSYQENCP 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00945 340 Pfam Protein kinase domain 64 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00945 340 ProSiteProfiles Protein kinase domain profile. 61 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00945 340 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 46 322 - -
Spst8g00945 340 Gene3D Transferase(Phosphotransferase) domain 1 144 325 - -
Spst8g00945 340 CDD STKc_WNK 59 319 - -
Spst8g00945 340 FunFam probable serine/threonine-protein kinase WNK9 144 325 - -
Spst8g00945 340 SUPERFAMILY Protein kinase-like (PK-like) 54 325 IPR011009 -
Spst8g00945 340 FunFam Probable serine/threonine-protein kinase WNK1 45 142 - -
Spst8g00945 340 Gene3D Phosphorylase Kinase; domain 1 45 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00945 Spst-Chr8 8354141 8359512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00945 35 323 MAP Kinase Kinase Kinase AT5G55560 78.840 1.66e-178 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Spst8g00945 Pkinase 1.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00945 K08867 - gmx:100786910 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00945 8 8354141 8359512 Spst8g00945 8 8354141 8359512 ECH
Spst6g01950 6 19060811 19061937 Spst8g00945 8 8354141 8359512 PCT