Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00944 ATGCAGAACACAAGAAACTTTTCTGAGTTTCTAAGGAGGCTGTTTTTCTTTGCTATCATTTTCTTTATCATAGAATGTACAAGAGGAAGAGGTGAGTTATCAGAATCTGAGTCTTTCTTTAATTTCCTAAGGGCCCTTGATACCAAAAACGTGCTTAATAACAGTACCTGGATTGGATCACCATCACATCCATGCTTGGTGAAGTTGAATGGTGTAAGATGTGACTCAAATGCTTCCAAAATTGTACATATAAGGCTTGAGAACTTGAACCTTAGTGGCACAATTGATGCACATTCACTATGCAGGCTCCAAAAGTTAAGAGTCGTGAGCTTGGCTAACAACAACATCAGAGGAACCATCCCACATTCAATTTTGCATTGTACAAGGTTGACACATTTCAATGTAACCAGCAACCAATTGAGTGGGAGGTTGCCAAAGGCCTTAACAAAATTGAAACATCTTAGGAGCTTGGACATATCTAATAACAACTTTTCTGGTATGATCCCTAGAAAACAACAATATATGCGACTATTTACTTATTATTATGTGACACCAAGCAAAAAGTTGGAAAGCAATGGTACCAAAGAGTGGCTCAAGGAAAGTGATACAAACGCAATGCAGCAACCAACACCAGATTCTTCAATAGACACTGCTCCTAATCCACGGAATTCGAAGACAGAAACTTTGGTGGTGTTCATTTTCGGTACTGTAGTGCTTTTGTCAGCCCTTTACTTTCTGGTAAAGAAGTCATTAAAGTTTAATGAAGGGATGGAGGTAGTTAAAGAGGATCATGGTGTGTTAAAGGCTTCAACTAAAGAAGTTCAAGAGGTGAAGCTAAACGAAGGAGATTCTGAGCTTGTTTTCTTTGTTGAAGATCGTGAAAGGTTCACACTGGAGGACCTTCTTCGAGCCACTGCTGACTTGAGGAGTGAAGGCTTTTGCAGCAGCCTTTACAAGGTGAAACTGGAGAACAATGTTCACTATGCAGTCAAACGATTGAAGAACTTGCAGGTTTCCTTGGAAGCATTTGGTGAAACATTTAGGAAGATTAGTAACTTGAAGCATCAGAACATCCTCCCCCTTGTTGGTTATCGTTCCACCAGTGAAGAAAAATTCATCATTTACAAATATCAAAACAATGGAAGCCTGCTTAATCTGTTAAACGATTATATAGCAGGTAGAAAAGATTTCCCGTGGAAACTGCGTCTGAATATAGCATGTGGAATTGCAAGGGGTTTGGCCTTCATATATAGAAAGTTAGATGAACAGGAGGAGGTGATTCCTCACGGAAATCTGAAGCCATCAAACATCCTTCTAGATGAGAACAATGAGCCACTAATAAGTGAGCATGGTTTATCAAAATTCATGGACCCAAATAGAGGTTTTCTCTTTTCCTCTCAGGGATACACAGCGCCTGAAAAGAGTTTAACAGAAAAGGGTGATGTGTACAGTTTTGGAGTGATTCTCCTTGAACTACTAACAGGAAAAAGCACAGAAGTGAGCAGAATAGATATTGCCAGATGGGTGAGGTCCATGGTGAGGGAGGAATGGACAGGAGAAGTCTTTGACAAGGAAGTTAGGGAGAATGAGCATCAATGGGCCTTTCCTCTTCTGAACATAGCCCTCTTGTGTGTGTCACGTTTCCAAGAAAATAGGCCAACCACTGTGGAGATTTTGGAGAAGATAGAGGAGGTCATGGATCAACATGAACAACATCAGGAACGTTTTGCTTTCAAATGTTGTTCCAATGGATCCAGCCGTGATGAGTGTTGTTCACTTCACAAAATCATACCAGATACATGGGATTCTCCAGGATCAAATTATTGA 1827 0.4028 MQNTRNFSEFLRRLFFFAIIFFIIECTRGRGELSESESFFNFLRALDTKNVLNNSTWIGSPSHPCLVKLNGVRCDSNASKIVHIRLENLNLSGTIDAHSLCRLQKLRVVSLANNNIRGTIPHSILHCTRLTHFNVTSNQLSGRLPKALTKLKHLRSLDISNNNFSGMIPRKQQYMRLFTYYYVTPSKKLESNGTKEWLKESDTNAMQQPTPDSSIDTAPNPRNSKTETLVVFIFGTVVLLSALYFLVKKSLKFNEGMEVVKEDHGVLKASTKEVQEVKLNEGDSELVFFVEDRERFTLEDLLRATADLRSEGFCSSLYKVKLENNVHYAVKRLKNLQVSLEAFGETFRKISNLKHQNILPLVGYRSTSEEKFIIYKYQNNGSLLNLLNDYIAGRKDFPWKLRLNIACGIARGLAFIYRKLDEQEEVIPHGNLKPSNILLDENNEPLISEHGLSKFMDPNRGFLFSSQGYTAPEKSLTEKGDVYSFGVILLELLTGKSTEVSRIDIARWVRSMVREEWTGEVFDKEVRENEHQWAFPLLNIALLCVSRFQENRPTTVEILEKIEEVMDQHEQHQERFAFKCCSNGSSRDECCSLHKIIPDTWDSPGSNY 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00944 608 SUPERFAMILY Protein kinase-like (PK-like) 297 562 IPR011009 -
Spst8g00944 608 Pfam Leucine rich repeat 105 164 IPR001611 GO:0005515
Spst8g00944 608 FunFam Nuclear pore complex protein NUP107 32 190 - -
Spst8g00944 608 SUPERFAMILY L domain-like 43 171 - -
Spst8g00944 608 Gene3D Transferase(Phosphotransferase) domain 1 379 585 - -
Spst8g00944 608 Gene3D Phosphorylase Kinase; domain 1 268 377 - -
Spst8g00944 608 ProSiteProfiles Protein kinase domain profile. 303 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00944 608 PANTHER OS05G0588300 PROTEIN 15 570 - -
Spst8g00944 608 Pfam Protein tyrosine and serine/threonine kinase 320 561 IPR001245 GO:0004672|GO:0006468
Spst8g00944 608 Gene3D Ribonuclease Inhibitor 34 196 IPR032675 -
Spst8g00944 608 MobiDBLite consensus disorder prediction 198 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00944 Spst-Chr8 8348834 8351166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00944 14 565 Receptor kinase-like Gene Family AT5G53320 30.256 7.85e-70 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst8g00944 PK_Tyr_Ser-Thr 2.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00944 - - vra:106763201 999.579