Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00938 ATGCCACAACACCCCCTCCACCTTCCTATATATACCTTGAACAAACTTTGTCTTGCTCCTCACATTTTCACCATTGCACAAATTTTCTCTTTTCTTTTCCACAAAATGCCGAACCAAGATATTTGCAGTTACCTTACAGAACCTCGTCTTGTAACCAGAAAGTTCTTGGCCAGACCTCAACATGAGGGTGTTGGGGCAGTTGTTAGAAGAAGCATAGGGAGATTTGAGCTCAAGTACTTTGATCCTTTCCTTGTCTTGGATGAATTCTCAGTCTCTGCTCCTGCTGGGTTTCCTGATCATCCGCATAGAGGATTTGAGACAGTCACATACATGTTGCAGGGAGCTGTAACACATGAAGATTTTGAAGGACGAAAGGGAACAATTGAAGCTGGTGACTTGCAGTGGATGACTGCAGGGAGAGGGATAGTTCATTCAGAAATGCCTGCAGCTCAAGGAACCCAAAAGGGTCTCCAACTTTGGATTAACCTCTCTTCAAAACATAAAATGATTGAGCCAAGGTACCAAGAAATGCTGAGCAAGGACATAGCTGAAACTGTGGTAGATGGTATCAAAGTTAGAGTGATAGCAGGGGAAGCTCTTGGAATAAAGTCTCCAATCTACACAAGGACACCAACCATGTACTTGGATTTTTCCCTTAAACCTGGTGCTCACCTGCAACAACTAATACCAAAATCTTGGAATGCTTTTGTATACATATTGGAAGGAGAGGGTATTTTTGGGAATCAAAAGTCTCAACCTGTGACTTCTCATCATATACTTCTTCTTAGTTCTGGGGATGGACTTGAGGCATGGAACAAATCTTCTAAGGTTCTTAGGTTCATTTTGGTTGGAGGGGAACCATTGGGGGAACCTGTGGTGCAATTTGGACCCTTTGTGATGAACACTCAAGAAGAAGTTGACCAAACAATTGATGATTTTGAGAATTATACCAACGGATTTGAGAAAGCAAGACACTGGAGATCTGAAAGTGCAATTAACCTTGATTATTGA 1011 0.4204 MPQHPLHLPIYTLNKLCLAPHIFTIAQIFSFLFHKMPNQDICSYLTEPRLVTRKFLARPQHEGVGAVVRRSIGRFELKYFDPFLVLDEFSVSAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGRKGTIEAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLSSKHKMIEPRYQEMLSKDIAETVVDGIKVRVIAGEALGIKSPIYTRTPTMYLDFSLKPGAHLQQLIPKSWNAFVYILEGEGIFGNQKSQPVTSHHILLLSSGDGLEAWNKSSKVLRFILVGGEPLGEPVVQFGPFVMNTQEEVDQTIDDFENYTNGFEKARHWRSESAINLDY 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00938 336 Gene3D Jelly Rolls 62 314 IPR014710 -
Spst8g00938 336 FunFam pirin 62 201 - -
Spst8g00938 336 CDD cupin_pirin_N 66 163 - -
Spst8g00938 336 SUPERFAMILY RmlC-like cupins 49 328 IPR011051 -
Spst8g00938 336 PIRSF Pirin 47 327 IPR012093 -
Spst8g00938 336 Pfam Pirin C-terminal cupin domain 214 318 IPR008778 -
Spst8g00938 336 CDD cupin_pirin_C 211 287 - -
Spst8g00938 336 PANTHER PIRIN-RELATED 45 330 IPR012093 -
Spst8g00938 336 Gene3D Jelly Rolls 183 288 IPR014710 -
Spst8g00938 336 Pfam Pirin 68 161 IPR003829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00938 Spst-Chr8 8311774 8314713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00938 48 324 Calmodulin-binding Proteins AT3G59220 58.065 8.60e-123 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00938 K06911 - gmx:100811930 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00938 8 8311774 8314713 Spst8g00938 8 8311774 8314713 ECH
Spst6g01965 6 19195860 19198930 Spst8g00938 8 8311774 8314713 PCT