Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00931 ATGATGAGTGGGAATTATGACTCCATGATTTATTATGCGATCATAAGCTTTGAAAATTCTTCACGCTGTTATTTCTTGCTTGAATTGTTGCCGATGGCATCTTCTTCAGACACGTGGATGAAGGAATATAATGAAGCACTGAAACTTGCTGATGATATCAGTGGTATGATTTCTGAGCAGAATTCCTTTCCTGCATCTGGACCAGAAACCCAGCGTCATTCATCTGCTACAAGGAGGAAGATTACTATATTGTGTACCAGGCTTGATAGCTTGCAATCCCTATTGTCTAAGCTTCCTGGAAAGCAGCCCATATCTGAAAAGGAGATGAATCGACGCAACGACATGGTTGCAAGTTTGAGATCAAAAGTTAATCAAATGGCTTCCACATTGAACATGTCAAACTTTGCAAATAGAGATAGTTTGCTTGGACCAGAAGGAAAACCAGATGCTATGGTCAGAACTGTTGGCCTGGACAACGATGGACTTGTTGGGTTTCAACGGCAAATTATGAAAGAACAAGATGAGGGCCTTGAGCAATTGGAAGATACTATAGCTAGCACAAAACATATTGCTTTGGCAGTGAATGAAGAGTTGGGTTTGCACACCAGACTCATTGATGGCTTGGACCAGCATGTAGATGTCACAGATTCCCGGCTCAGGCGGGTGCAGAAGAACTTGGCAGTTTTAAATAAGCGGACCAAGGGTGGTTGCTCCTTCCTGCGCATGCTTTTATCAGTGATTGGTATAGTGCTTTTGGTTGTTGTTATTTGGCTATTGGTCAAATATTTGTGA 792 0.4205 MMSGNYDSMIYYAIISFENSSRCYFLLELLPMASSSDTWMKEYNEALKLADDISGMISEQNSFPASGPETQRHSSATRRKITILCTRLDSLQSLLSKLPGKQPISEKEMNRRNDMVASLRSKVNQMASTLNMSNFANRDSLLGPEGKPDAMVRTVGLDNDGLVGFQRQIMKEQDEGLEQLEDTIASTKHIALAVNEELGLHTRLIDGLDQHVDVTDSRLRRVQKNLAVLNKRTKGGCSFLRMLLSVIGIVLLVVVIWLLVKYL 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00931 263 SMART tSNARE_6 162 229 IPR000727 -
Spst8g00931 263 SUPERFAMILY SNARE fusion complex 165 228 - -
Spst8g00931 263 Gene3D - 169 231 - -
Spst8g00931 263 Pfam SNARE domain 204 255 IPR000727 -
Spst8g00931 263 CDD SNARE_Qc 170 227 - -
Spst8g00931 263 PANTHER SYNTAXIN 62 250 IPR045242 -
Spst8g00931 263 FunFam syntaxin-51 isoform X2 169 231 - -
Spst8g00931 263 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 167 229 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00931 Spst-Chr8 8245682 8247577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00931 32 263 SNARE and Associated Proteins AT1G16240 70.815 1.98e-118 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00931 K08503 - gmx:100782666 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00931 8 8245682 8247577 Spst8g00931 8 8245682 8247577 ECH
Spst6g01986 6 19571429 19574507 Spst8g00931 8 8245682 8247577 PCT