Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00919 ATGGGGTTAGTCTCCAGGCCCCTTTCTCTCGTGCTGGGTCGCCCTTTATCTCGTGGTGGGTCACGTGGGCCAAAGGTTGGTGAAGGCATGGATATGGATATGGATTGCAAGGGGAACAAAATCGTAGATACCGTCGTAGTTGATCAGCAAGGGAAAGGAGATTTCAGAACAATTCAAGCTGCTCTCAATTCCATAAAGGAAAACAATGATGAATGGGTCAAAATTCACATAAATGCTGGGCAATACATAGAGAAAGTGATAATAAGGAAAGATAAAGGATGCATATTTTTAGAAGGAGAAGGGAAAGATGTGACGATAATCACATCGAGTGGTTACCACCGTGCAAGCATAGCATCAAGCAACGATGATTTAAAAGTGAACGAGCATTTGGGTGCTACATTTGTTTCTCTTCCCCCTAACGTTATTGTTATCGGCATTACCTTCAAGGTAGAACCCATTCAACCTGCACTAGCAGCGGCCATATACGGTGACAAATCGGTGTTCTTTAAGTGTGGTTTCGTAAGTTATCAAGATACTCTCTTCGACGCAATGGCTCGTCATTATTTTAAAGATTGTTACATTGAAGGTGAAGTTGACTTCATTTATGGGAGTGGTCAATCATACTTCGAGGATTGTACCATCAATGCTACGCTTGGAAAATCTCCTCCAGGTTTTGTAACGGCGCAATCGCGAGAGGCAGAAAATGATAACAGTGGTTTTGTGTTTAGGGCAGGTTGTGTGATTGGAAACGGTGAAGTGAATCTAGGAAGAGCCTATGGACCGTACTCGACGGTTATATTTTACGAAACATATTTATCTTCTATCGTATCCCCTGAAGGATGGGATGCTTGGGGCTACGCTGGCCAAGAGTCCAATTTTACTTATGCTGAGGTAAACTGTAGCGGACCAGGAGCAAATGCCACGGGACGCGTTAAGTGGGAGAAGAACCTCACCAGTTCACAATTAATGAAGTTTTCTTTGTCATCTTTTATCAACCAAGAAGGCTGGCTTTCTTACTTACCAATTAAGTTTTAG 1035 0.429 MGLVSRPLSLVLGRPLSRGGSRGPKVGEGMDMDMDCKGNKIVDTVVVDQQGKGDFRTIQAALNSIKENNDEWVKIHINAGQYIEKVIIRKDKGCIFLEGEGKDVTIITSSGYHRASIASSNDDLKVNEHLGATFVSLPPNVIVIGITFKVEPIQPALAAAIYGDKSVFFKCGFVSYQDTLFDAMARHYFKDCYIEGEVDFIYGSGQSYFEDCTINATLGKSPPGFVTAQSREAENDNSGFVFRAGCVIGNGEVNLGRAYGPYSTVIFYETYLSSIVSPEGWDAWGYAGQESNFTYAEVNCSGPGANATGRVKWEKNLTSSQLMKFSLSSFINQEGWLSYLPIKF 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00919 344 FunFam Pectinesterase 39 341 - -
Spst8g00919 344 Pfam Pectinesterase 45 333 IPR000070 GO:0030599|GO:0042545
Spst8g00919 344 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 43 338 - -
Spst8g00919 344 SUPERFAMILY Pectin lyase-like 44 343 IPR011050 -
Spst8g00919 344 Gene3D - 38 344 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00919 Spst-Chr8 8115755 8117921 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00919 33 290 Carbohydrate Esterase AT2G19150 40.741 9.96e-63 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00919 - - gmx:100803932 460.685