Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00918 ATGTTGCTCATTAGTTGTTGTTTCTTTTGTCTTTCTAAAGCCATAGACTGTGGTGGGAAGAATATTTCACAAACTATCATTGTTGGCCATAGAGCAGCAGATTTTAAAACAATTCAGGAGGCCATTGATTCTGTAGACACAGACAATGATAAATGGGTCAAGATTCATATACAAGCCGGCTTATACGTGGAAATGGTTACTATTCCCATAGAAAAGGCGTGCATAATTTTAGAAGGCGAGGGTAGCGAGAAAACATACATGAGTTATGGGGATCACGGATCAATAAACTACAACGCTACGTTCACTTCTTTTGCATCCTATGTGATTGCAACTGGCATTACTTTCAAGGGTGAAGTCGACTTTATATATGGTGCTGCACAATCTTTTTATGAGAACTGTTGGATAAATGCTTTGGGGAGATATCCAAATTTACCAGGCTTTGTGACAGCTCAAGGACGAGACTCAGCAGATGACCCAGGTGGTTTTGTGTTTGAAGGGGGTTCCATTACAGGGAACGGTAAAGTGAATTTAGGAAGAGCATGGAGACCATACTCCAGAGTCATTTTTCATAAAACCTATTTTTCCTCCATTATAACTCCTCAAGGATGGGATGCTTGGAATGCTGCTGGCAATGAGAGTAGGACCACTTATGCTGAAGTTGACTGTAAAGGACCAGGAGCTGATACTTCCAAGCGTGTTCCGTGGATGAAGAGTTTAAATGCTTCGGAGCTGGATCACTTTTCTTTCGCATCTTTTATCAATAAAGATGGATGGATTGATAACTTACCATCAATATCCTAG 801 0.4057 MLLISCCFFCLSKAIDCGGKNISQTIIVGHRAADFKTIQEAIDSVDTDNDKWVKIHIQAGLYVEMVTIPIEKACIILEGEGSEKTYMSYGDHGSINYNATFTSFASYVIATGITFKGEVDFIYGAAQSFYENCWINALGRYPNLPGFVTAQGRDSADDPGGFVFEGGSITGNGKVNLGRAWRPYSRVIFHKTYFSSIITPQGWDAWNAAGNESRTTYAEVDCKGPGADTSKRVPWMKSLNASELDHFSFASFINKDGWIDNLPSIS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00918 266 Gene3D - 19 116 IPR012334 -
Spst8g00918 266 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 21 116 - -
Spst8g00918 266 Pfam Pectinesterase 115 255 IPR000070 GO:0030599|GO:0042545
Spst8g00918 266 Gene3D - 117 264 IPR012334 -
Spst8g00918 266 SUPERFAMILY Pectin lyase-like 24 261 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00918 Spst-Chr8 8101154 8103193 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00918 34 259 Carbohydrate Esterase AT1G05310 31.834 1.42e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00918 - - var:108336510 345.51