LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst8g00918	ATGTTGCTCATTAGTTGTTGTTTCTTTTGTCTTTCTAAAGCCATAGACTGTGGTGGGAAGAATATTTCACAAACTATCATTGTTGGCCATAGAGCAGCAGATTTTAAAACAATTCAGGAGGCCATTGATTCTGTAGACACAGACAATGATAAATGGGTCAAGATTCATATACAAGCCGGCTTATACGTGGAAATGGTTACTATTCCCATAGAAAAGGCGTGCATAATTTTAGAAGGCGAGGGTAGCGAGAAAACATACATGAGTTATGGGGATCACGGATCAATAAACTACAACGCTACGTTCACTTCTTTTGCATCCTATGTGATTGCAACTGGCATTACTTTCAAGGGTGAAGTCGACTTTATATATGGTGCTGCACAATCTTTTTATGAGAACTGTTGGATAAATGCTTTGGGGAGATATCCAAATTTACCAGGCTTTGTGACAGCTCAAGGACGAGACTCAGCAGATGACCCAGGTGGTTTTGTGTTTGAAGGGGGTTCCATTACAGGGAACGGTAAAGTGAATTTAGGAAGAGCATGGAGACCATACTCCAGAGTCATTTTTCATAAAACCTATTTTTCCTCCATTATAACTCCTCAAGGATGGGATGCTTGGAATGCTGCTGGCAATGAGAGTAGGACCACTTATGCTGAAGTTGACTGTAAAGGACCAGGAGCTGATACTTCCAAGCGTGTTCCGTGGATGAAGAGTTTAAATGCTTCGGAGCTGGATCACTTTTCTTTCGCATCTTTTATCAATAAAGATGGATGGATTGATAACTTACCATCAATATCCTAG	801	0.4057	MLLISCCFFCLSKAIDCGGKNISQTIIVGHRAADFKTIQEAIDSVDTDNDKWVKIHIQAGLYVEMVTIPIEKACIILEGEGSEKTYMSYGDHGSINYNATFTSFASYVIATGITFKGEVDFIYGAAQSFYENCWINALGRYPNLPGFVTAQGRDSADDPGGFVFEGGSITGNGKVNLGRAWRPYSRVIFHKTYFSSIITPQGWDAWNAAGNESRTTYAEVDCKGPGADTSKRVPWMKSLNASELDHFSFASFINKDGWIDNLPSIS	266

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst8g00918	266	Gene3D	-	19	116	IPR012334	-
	Spst8g00918	266	PANTHER	ACYL-COA THIOESTER HYDROLASE YBHC-RELATED	21	116	-	-
	Spst8g00918	266	Pfam	Pectinesterase	115	255	IPR000070	GO:0030599\|GO:0042545
	Spst8g00918	266	Gene3D	-	117	264	IPR012334	-
	Spst8g00918	266	SUPERFAMILY	Pectin lyase-like	24	261	IPR011050	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst8g00918	Spst-Chr8	8101154	8103193	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst8g00918	34	259	Carbohydrate Esterase	AT1G05310	31.834	1.42e-36	132

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst8g00918	-		-	var:108336510	345.51

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