Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00915 ATGGTTATCTCCACACAAGCCATAGATTGTGGTGGAAAGAGTATTTCAAATACCCTAATTGTTGATCCACATGGCAAAGATAAAGCATTTACAACGATTCAAGATGCCATTAATTCTGTGAAGAGCAACAACGATCAATGGGTCAAGATTCACATAAAAGCAGGCTCATATTTAGAAAAGCCTCACATTCCCGTAGAAAAGCCATGCATCATTTTAGAAGGAGAAGGAAGCCAAAACACAATCATAAGTTTTTCAGACCACAACGGAACAAATGGTGGAACGGCCGATAGTGCTACATTCACTTCATCGCCACCCAATGTTATTGTGACTGGCATTACTTTCAGGAACCCGTATCGTGATGGACCAGCATTGGCAGCAAGAATATATGGAGACAAATCTTTCCTTTATAACTCTAGTTTTTTGGGTTATCAAGACACTTTATTTGACGCAAATGGACGCCATTATATAAAAAACTGTTACATTGAAGGTGAAATAGATTTCATTTTTGGTGCTGGACAATCTTATTACGAGGATTGTAAGATCAATGCTTTGGGGAGATATCCAAATTTACCAGGCTTTGTGACAGCTCAAGGACGAGACTCAGCAGATGACCCAGGTGGTTTTGTGTTTGAAGGGGGTTCCATTACAGGGAACGGTAAAGTGAATTTAGGAAGAGCATGGAGACCATACTCCAGAGTCATTTTTCATAAAACCTATTTTTCCTCCATTATAACTCCTCAAGGATGGGATGCTTGGAATTCCCTTGGCAAAGAGAGCACGATCACTTATGGTGAGGTTGAGTGTGAAGGACCAGGAGCTGATACTTCAAAGCGTGTTCCGTGGATGAAGAAATTAAGTTCCTCTGAGATGGAACAATTTTCCTTCGCATCTTTTATTAATAAAGATAGATGGGTTGATAATTTACCAACAATATCTTAA 939 0.3951 MVISTQAIDCGGKSISNTLIVDPHGKDKAFTTIQDAINSVKSNNDQWVKIHIKAGSYLEKPHIPVEKPCIILEGEGSQNTIISFSDHNGTNGGTADSATFTSSPPNVIVTGITFRNPYRDGPALAARIYGDKSFLYNSSFLGYQDTLFDANGRHYIKNCYIEGEIDFIFGAGQSYYEDCKINALGRYPNLPGFVTAQGRDSADDPGGFVFEGGSITGNGKVNLGRAWRPYSRVIFHKTYFSSIITPQGWDAWNSLGKESTITYGEVECEGPGADTSKRVPWMKKLSSSEMEQFSFASFINKDRWVDNLPTIS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00915 312 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 16 306 - -
Spst8g00915 312 FunFam Pectinesterase 13 309 - -
Spst8g00915 312 Pfam Pectinesterase 24 301 IPR000070 GO:0030599|GO:0042545
Spst8g00915 312 SUPERFAMILY Pectin lyase-like 15 308 IPR011050 -
Spst8g00915 312 Gene3D - 12 310 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00915 Spst-Chr8 8079697 8084158 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00915 9 258 Carbohydrate Esterase AT2G19150 48.077 1.30e-74 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00915 - - pvu:PHAVU_008G271600g 461.455