Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00913 ATGACATTCCTCCTGATTTTAGTTTCTAGTTGCTTCTTTTGCCTTAGTAAAGCTATAGATTGTGGTGGAAAGAGTATTTCAGATACCATAATTGTTGATCCACATGGCAAAGATGAAGCATTTACAACAATTCAAGATGCCATTAATTCTGTGAAGAGCCAGAATGATCAATGGATCAAGATTCACATAAAAGCAGGGTCATATACAGAAAAGCCTCAAATTCCCAGACAAAAACCATGCATCATATTAGAAGGAGAAGGTAGCCAAAATACAATCATAAGTTTTTCAGACCACGGCGGAATAAACAGTGGTGGAACAAGCGATAGTGCTACATTCACCTCATACCCACCCAATGTGATTGTGACTGGTATTACTTTCAAGAACCCATTTGGTTATTCACCAGCAGTGGCAGCAAGGATATATGGAGACAAATCTTTCTTCTATAACTGTAGTTTCGTGGGTTATCAAGACACTTTACTTAACGCAAAGGGACGTCATTATATTAAAGATTGTTACATTGAAGGTGAAGTAGACTTTATTTTTGGTGCTGCACAATCTTATTACGAGAACTGTTCGATCAATGCTGTGGCGAGAAATCCAAATATACCCGGCTTTGTGACAGCTCAAGGACGAAACTCATCAGATGACCCAGGTGGTTTTGTGTTTGAAGGCGGTTCAATTAATGGAAATGGCAAAGTGAATTTAGGAAGAGCATGGAGACCATACTCCAGAGTCATTTTTCATAAAACCTATTTTTCCTCCATTATAACTCCTCAAGGATGGGATGCTTGGAATGCTGCTGGCAATGAGAGCACGATCACTTATGTTGAAGTTGATTGTGAAGGAGCAGGAGCTGATACTTCAAAACGTGTTCCATGGATGAAGAAATTAAATTCTTCAGAGATGGAACAATTTTCTTTTGCATCTTTTATCAATGAAGATGGATGGGTTGATAACTTACCAACAATCTCTTAG 975 0.3846 MTFLLILVSSCFFCLSKAIDCGGKSISDTIIVDPHGKDEAFTTIQDAINSVKSQNDQWIKIHIKAGSYTEKPQIPRQKPCIILEGEGSQNTIISFSDHGGINSGGTSDSATFTSYPPNVIVTGITFKNPFGYSPAVAARIYGDKSFFYNCSFVGYQDTLLNAKGRHYIKDCYIEGEVDFIFGAAQSYYENCSINAVARNPNIPGFVTAQGRNSSDDPGGFVFEGGSINGNGKVNLGRAWRPYSRVIFHKTYFSSIITPQGWDAWNAAGNESTITYVEVDCEGAGADTSKRVPWMKKLNSSEMEQFSFASFINEDGWVDNLPTIS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00913 324 FunFam Pectinesterase 24 321 - -
Spst8g00913 324 SUPERFAMILY Pectin lyase-like 27 320 IPR011050 -
Spst8g00913 324 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 25 318 - -
Spst8g00913 324 Gene3D - 23 322 IPR012334 -
Spst8g00913 324 Pfam Pectinesterase 31 313 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00913 Spst-Chr8 8056850 8058536 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00913 11 270 Carbohydrate Esterase AT2G19150 47.273 2.32e-75 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00913 - - var:108336510 447.973