Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00878 ATGAAGGCCCGTGTCCTAGGAAATTTATGGCGAAGGCTGTGCCTTTTCTTGTCGCTGTTGGCCTGTTTTTGTCGTTCTCCGAGGTTATCCTTTGGGTTTTTCAGAACACAAACATTGCCATCGCATGTGTATCTCTTAGAATCTGGTGGGGAATCGGAGAAGCACCGAAAGAGGGTTATAATTGCAGCCACTGGTTCTGCAATAATGTATGGTCAAGGTGTGCAGCTTGCAGGAATCAGAGAAGAAGATGCCCTTCAGATTGCATTTTCTCTCCATATTTCCCTGCCAAAGATCCTCAAAGATTTTCCTCTGTTCATAAAATCTATGGTGGCAGCAACGTTGGCAAAATGCTTCAGGATTGAAGACCCAGTTTATGGGTGTGTTGGGATAATCTCTAAGTTATATGAGCAAATCCGCAATACAGAAATTGAACTTGCCCAAGTTCAAACTCAGATTACCTGTCACAAGCTTCAACTTCCACACCCAAAAAATGCAGAAACAAACTTCAATGTGTTGTCAACAATGGAAGTTGAACCAAATTTTCGAATACCAGCAGCACAAAGTAGCAACCCAAGAGAGTTTCAACGGCCAATTCAGGTTCATTGGTTTAATTGA 615 0.4244 MKARVLGNLWRRLCLFLSLLACFCRSPRLSFGFFRTQTLPSHVYLLESGGESEKHRKRVIIAATGSAIMYGQGVQLAGIREEDALQIAFSLHISLPKILKDFPLFIKSMVAATLAKCFRIEDPVYGCVGIISKLYEQIRNTEIELAQVQTQITCHKLQLPHPKNAETNFNVLSTMEVEPNFRIPAAQSSNPREFQRPIQVHWFN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00878 204 Coils Coil 131 151 - -
Spst8g00878 204 Pfam Lateral organ boundaries (LOB) domain 109 149 IPR004883 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00878 94 166 AS2 family AT3G26660 38.158 1.11e-09 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Spst8g00878 LOB 1.6e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00878 - - ccaj:109810657 110.538