Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00870 ATGAAAAATCTTGCGAATGGAATCACATTGAAGACGGTGGTTCGTGAGTTTCTTGCAGCAAAAGAAAAACACTTCCATGCAGAGTATTTTTCGTTTCTTTCTGCAGATGAAGACTTGTCCATGGAAATGGATGAAAGGGGTCTCAAAAGGAAAGCTGAAGAAGTATCTAATTATAACCCATCAAAGAGAATCAAGAATGAAGAAGGGTGTAACAGTAACCACGGTGATGACGTGCAGAAGTTGAGTTTAACCAAAAGGGTTAGTCTTTTCCAACGTTGCAACAAAGAAGAAGAGACTAATTATAACCCACGAAAGAGAATTAAAAGTGAGGAGGGATGCAGCAATAGCAGATCAAAGTTTGAATATTTGGTGGATGCTGTTTCCTTATTTAGTGTATACGAAGAGGAAAGAGATTTACTAAAAAACAGGCATGATTTGATCAGAAATGGTGGAAGTGTGGATACTGAGAAAGAACAACCTCGTGAATCCGGTAAATTGCTGCCAAGGGAATTTCGAGAAAAGATCCAAGAACTGAATGGACGTGAGGTGAATTTTGTTACCGAAAAGAAACTTTTTGATACAGATTTGAACCCACAGAACGCTCGCTTGTCTATCCCACCCGGCAAGATTGTGAACAGGTTTCTTTCAGAAAGTGAGGAGTTATCGTTGAATGAACGCATGAGAGAAAGCAAAAGGCTTGGTGGCGTGTGGGTGAGTGTCTTGGATCCTGGTCTGAAAGAGTACAAGATGTGCTTGAAGAAGTGGAGGATGGAGAAAAGCTACGTGTACAACTTGACAAAGGGATGGAACCAAATGGTACGTGGGAATGATCTCAAACTCCATGATACGCTGCAACTTTGGTCCTTCAGAGTCTCCTCTCAGCTATGTTTCGCACTCGTCAAAATGTGA 909 0.4114 MKNLANGITLKTVVREFLAAKEKHFHAEYFSFLSADEDLSMEMDERGLKRKAEEVSNYNPSKRIKNEEGCNSNHGDDVQKLSLTKRVSLFQRCNKEEETNYNPRKRIKSEEGCSNSRSKFEYLVDAVSLFSVYEEERDLLKNRHDLIRNGGSVDTEKEQPRESGKLLPREFREKIQELNGREVNFVTEKKLFDTDLNPQNARLSIPPGKIVNRFLSESEELSLNERMRESKRLGGVWVSVLDPGLKEYKMCLKKWRMEKSYVYNLTKGWNQMVRGNDLKLHDTLQLWSFRVSSQLCFALVKM 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00870 302 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 30 302 IPR005508 GO:0003677
Spst8g00870 302 Gene3D - 176 300 IPR015300 -
Spst8g00870 302 ProSiteProfiles B3 DNA-binding domain profile. 253 302 IPR003340 GO:0003677
Spst8g00870 302 Pfam B3 domain-containing protein At2g31720-like 175 274 IPR005508 GO:0003677
Spst8g00870 302 CDD B3_DNA 235 297 IPR003340 GO:0003677
Spst8g00870 302 SUPERFAMILY DNA-binding pseudobarrel domain 185 300 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00870 Spst-Chr8 7740454 7741362 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00870 171 299 B3 DNA Binding Superfamily AT1G05930 27.692 2.79e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00870 - - pvu:PHAVU_008G194000g 333.569