Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00869 ATGGGTGGTTGTCTGAGTAAAAAAGGGTCAGAGCCAGAAGAGCACATTGGTTACAGACATGTTGCTGGGGGAGCTCAGGATCACAAGAGCCATGAACCCTTTGTCCAATCCAAACCCCCCTCTCATCAACCTTACCAATTACCCGTGAAACATGCACCTCAGGCTGCTTGGAGACCCACTGTTCCTTCTCCAAGCCCAAAACATGTTCACAGGGCTGATACCATCACTGGGAAGCCATTTGAGGATGTTAAGCAGCACTACTCACTTGGAAAAGAATTGGGGAGAGGCCAATTTGGGGTGACTTACCTCTGCACTGAAAATTCAACTGGCTTGCAATATGCCTGCAAATCCATTTCAAAGAGGAAGCTTGTGCGCAGAGATGACAAGGAAGATATGAAGAGGGAGATTCAAATCATGCAGCATTTAAGTGGACAATCTAACATTGTGGAGTTCAAAGGTACTTACGAGGATAAACACTCAGTTCATGTGGTTATGGAGCTTTGTGAAGGTGGCGAACTTTTTGATAGGATTATTGCCAAGGGGCACTACAGTGAAAGGGCTGCTGCTTCAGTATGTAGACAGATTGTTAAAGTTGTTAACATCTGCCATTTTATGGGGGTGATGCATAGGGATCTGAAGCCAGAGAATTTCTTGTTGTCCAGTAAGGATGATAAGGGACTTCTCAAGGCCACAGATTTTGGTTTGTCAGTCTTCATAGAAGAAGGAAAGGTGTATCGAGACATAGTTGGCAGTGCTTACTATGTTGCTCCAGAAGTTCTACGACGAAGCTATGGGAAGGAAGTAGATATATGGAGTGCAGGAGTTATACTGTATATCTTACTTAGTGGTGTACCTCCCTTTTGGGCAGAGACGGAAAAGGGAATATTTGATTCCATATTACGGGGTCATATTGATTTTGAAAGTAATCCGTGGCCTAGCATATCAAGCAGTGCTAAGGACCTTGTTCGGAAAATGCTTACAGAGCATCCAAAGAAACGCATTACTTCAGCTCAGGTTCTAGAGCACCCATGGCTTAAAGAAGGTGGAAATGCTTCTGACAAGCCAATAGACAGTGCAGTGCTTTCCAGAATGAAGCAATTCAGAGCAATGAATAAACTAAAAAAACTAGCCCTCAAGGTCATTGCTGAAAATCTTTCTGAAGAAGAGATCCAAGGTTTGAAGGCAATGTTCACAAATATGGACACTGACAATAATGGTACAATCACCTACGAGGAACTGAGGGAAGGATTGCAAAGACTTGGCTCAAAGCTAACTGAAGCTGAAGTGCGACAACTTATGGACGCCGCTGATGTAGATGGAAATGGCTCAATAGATTACATAGAATTCATCACTGCTACAATGCATAGACACCGGTTAGAGAGAGATGAACATCTTTACGGGGCCTTCCAATATTTTGACAAAGACGGCAGTGGGTATATCACAAGAGATGAACTGGAATCAGCCATGAAGGAGAATGGTATGGGTGATGAGGACACAATCAGGGAAATTATATCTGAAGTTGACACTGATAATGATGGTAGAATCAACTATGACGAATTTTGCACAATGATGAGAAGTGGAACCCAACAACAAAGCAAGCTATTCTAA 1608 0.431 MGGCLSKKGSEPEEHIGYRHVAGGAQDHKSHEPFVQSKPPSHQPYQLPVKHAPQAAWRPTVPSPSPKHVHRADTITGKPFEDVKQHYSLGKELGRGQFGVTYLCTENSTGLQYACKSISKRKLVRRDDKEDMKREIQIMQHLSGQSNIVEFKGTYEDKHSVHVVMELCEGGELFDRIIAKGHYSERAAASVCRQIVKVVNICHFMGVMHRDLKPENFLLSSKDDKGLLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRSYGKEVDIWSAGVILYILLSGVPPFWAETEKGIFDSILRGHIDFESNPWPSISSSAKDLVRKMLTEHPKKRITSAQVLEHPWLKEGGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIQGLKAMFTNMDTDNNGTITYEELREGLQRLGSKLTEAEVRQLMDAADVDGNGSIDYIEFITATMHRHRLERDEHLYGAFQYFDKDGSGYITRDELESAMKENGMGDEDTIREIISEVDTDNDGRINYDEFCTMMRSGTQQQSKLF 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00869 535 ProSitePatterns EF-hand calcium-binding domain. 473 485 IPR018247 -
Spst8g00869 535 Gene3D Transferase(Phosphotransferase) domain 1 173 352 - -
Spst8g00869 535 Coils Coil 410 430 - -
Spst8g00869 535 SMART efh_1 428 456 IPR002048 GO:0005509
Spst8g00869 535 SMART efh_1 464 492 IPR002048 GO:0005509
Spst8g00869 535 SMART efh_1 499 527 IPR002048 GO:0005509
Spst8g00869 535 SMART efh_1 392 420 IPR002048 GO:0005509
Spst8g00869 535 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Spst8g00869 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Spst8g00869 535 Pfam Protein kinase domain 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00869 535 SUPERFAMILY Protein kinase-like (PK-like) 71 366 IPR011009 -
Spst8g00869 535 Gene3D - 353 531 - -
Spst8g00869 535 ProSitePatterns EF-hand calcium-binding domain. 508 520 IPR018247 -
Spst8g00869 535 ProSitePatterns EF-hand calcium-binding domain. 401 413 IPR018247 -
Spst8g00869 535 MobiDBLite consensus disorder prediction 8 35 - -
Spst8g00869 535 CDD EFh_PI-PLC 393 526 - -
Spst8g00869 535 SUPERFAMILY EF-hand 384 524 IPR011992 -
Spst8g00869 535 ProSiteProfiles EF-hand calcium-binding domain profile. 388 423 IPR002048 GO:0005509
Spst8g00869 535 Pfam EF-hand domain pair 393 453 IPR002048 GO:0005509
Spst8g00869 535 Pfam EF-hand domain pair 463 525 IPR002048 GO:0005509
Spst8g00869 535 ProSiteProfiles Protein kinase domain profile. 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00869 535 ProSiteProfiles EF-hand calcium-binding domain profile. 424 459 IPR002048 GO:0005509
Spst8g00869 535 ProSiteProfiles EF-hand calcium-binding domain profile. 496 530 IPR002048 GO:0005509
Spst8g00869 535 ProSitePatterns EF-hand calcium-binding domain. 437 449 IPR018247 -
Spst8g00869 535 MobiDBLite consensus disorder prediction 1 47 - -
Spst8g00869 535 Gene3D Phosphorylase Kinase; domain 1 89 172 - -
Spst8g00869 535 PANTHER SERINE/THREONINE-PROTEIN KINASE 81 520 - -
Spst8g00869 535 FunFam Calcium-dependent protein kinase 1 353 528 - -
Spst8g00869 535 ProSiteProfiles EF-hand calcium-binding domain profile. 460 495 IPR002048 GO:0005509
Spst8g00869 535 CDD EFh 468 525 IPR002048 GO:0005509
Spst8g00869 535 FunFam calcium-dependent protein kinase 1 173 352 - -
Spst8g00869 535 FunFam Calcium-dependent protein kinase 1 89 172 - -
Spst8g00869 535 SMART serkin_6 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00869 535 CDD STKc_CAMK 86 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00869 Spst-Chr8 7735484 7739143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00869 65 535 EF-hand Containing Proteins AT3G20410 82.030 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst8g00869 Pkinase 2.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00869 K13412 - gmx:100794852 967.607